RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TSSK4Q6SA08 328 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 APBB1IPQ7Z5R6 666 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF410Q86VK4 478 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 METTL13Q8N6R0 699 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF707Q96C28 371 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IER2Q9BTL4 223 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TRAIPQ9BWF2 469 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PLEKHA4Q9H4M7 779 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM206Q9H813 350 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PANK4Q9NVE7 773 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZDHHC7Q9NXF8 308 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 WRAP73Q9P2S5 460 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EXOC7Q9UPT5 735 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 AKT3Q9Y243 479 aa9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MTF2Q9Y483 593 aaPredicted RBP9.55□□□□□ -0.88
PDLIM1P3-201ENST00000582370 COL4A2P08572 1712 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 BICDL2A1A5D9 508 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MYMKA6NI61 221 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PSMA7O14818 248 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RFPL2O75678 378 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SOD2P04179 222 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IDEP14735 1019 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DARSP14868 501 aaKnown RBP9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ERCC5P28715 1186 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PHKA2P46019 1235 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SLC11A1P49279 550 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZNF445P59923 1031 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZSCAN23Q3MJ62 389 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 UNQ6494/PRO21346Q6UXR6 183 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PPP4R3CPQ6ZMV5 832 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MTSS1LQ765P7 747 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 KCNK18Q7Z418 384 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ZBTB8OSQ8IWT0 167 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FGF14Q92915 247 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DNAJC19Q96DA6 116 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DHTKD1Q96HY7 919 aaPredicted RBP9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RPS6KC1Q96S38 1066 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PLIN2Q99541 437 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 REEP2Q9BRK0 252 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 HERC2P3Q9BVR0 1158 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ADAMTS10Q9H324 1103 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CHST12Q9NRB3 414 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM63CQ9P1W3 806 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DNAJB4Q9UDY4 337 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PCDHA5Q9Y5H7 936 aa9.54□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SMG1Q96Q15 3661 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TICRRQ7Z2Z1 1910 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM8BA6NDV4 472 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 KIAA0391O15091 583 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TEX28O15482 410 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GDF9O60383 454 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 USO1O60763 962 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 HIP1RO75146 1068 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FGFR1OPO95684 399 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TDGF1P13385 188 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TARSP26639 723 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ARL2P36404 184 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GPC3P51654 580 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CLCN3P51790 818 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 NLRP12P59046 1061 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TPM4P67936 248 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EHHADHQ08426 723 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PNOCQ13519 176 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CUL4BQ13620 913 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DHX8Q14562 1220 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CAMK4Q16566 473 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 LPAL2Q16609 132 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 ARSHQ5FYA8 562 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 FAM26FQ5R3K3 315 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 EFCAB12Q6NXP0 572 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PARM1Q6UWI2 310 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MAMSTRQ6ZN01 415 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 DYMQ7RTS9 669 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 IFNLR1Q8IU57 520 aaPredicted RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 GUF1Q8N442 669 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 LINC01465Q8N7H1 131 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 KDF1Q8NAX2 398 aaPredicted RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM174Q8WUU8 243 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PRIMPOLQ96LW4 560 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 CEP89Q96ST8 783 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 BPIFA3Q9BQP9 254 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM175Q9BSA9 504 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 PRKD2Q9BZL6 878 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 TMEM134Q9H6X4 195 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MRPL44Q9H9J2 332 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 RXFP1Q9HBX9 757 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 INPP5FQ9Y2H2 1132 aa9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 MRPS17Q9Y2R5 130 aaKnown RBP9.53□□□□□ -0.88
PDLIM1P3-201ENST00000582370 SMTNL1A8MU46 457 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 C2CD2LO14523 706 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 OFD1O75665 1012 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 CD72P21854 359 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 FSHRP23945 695 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 RPL13P26373 211 aaKnown RBP9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 GLUD2P49448 558 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 RAB27AP51159 221 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 NPEPPSP55786 919 aa9.52□□□□□ -0.89
PDLIM1P3-201ENST00000582370 LRRC63Q05C16 580 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms