RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 SCN1AP35498 2009 aa17.76■□□□□ 0.43
RNF43-206ENST00000582293 LINC01565O15544 149 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 XPOTO43592 962 aaKnown RBP17.75■□□□□ 0.43
RNF43-206ENST00000582293 GLP2RO95838 553 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 NRIP1P48552 1158 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 GLUD2P49448 558 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 CLDN10P78369 228 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 ADAM9Q13443 819 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 CTC1Q2NKJ3 1217 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 USP41Q3LFD5 358 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 FAM171A1Q5VUB5 890 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 CEP135Q66GS9 1140 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 RBM23Q86U06 439 aaKnown RBP17.75■□□□□ 0.43
RNF43-206ENST00000582293 WDR49Q8IV35 697 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 CCDC127Q96BQ5 260 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 CGRRF1Q99675 332 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 TMEM63CQ9P1W3 806 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
RNF43-206ENST00000582293 XIRP2A4UGR9 3374 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 LRRIQ3A6PVS8 624 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 C2CD2LO14523 706 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 MAPK13O15264 365 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 CLASP2O75122 1294 aaKnown RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 MBD3O95983 291 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 CNPP09543 421 aaKnown RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 DLATP10515 647 aaKnown RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 TKTP29401 623 aaKnown RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 LTBRP36941 435 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 LILRA4P59901 499 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 SURF1Q15526 300 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 KLHL10Q6JEL2 608 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 PRSS55Q6UWB4 352 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 RSPO2Q6UXX9 243 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 LNX1Q8TBB1 728 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 NELFBQ8WX92 580 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 SUSD3Q96L08 255 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 KLHL5Q96PQ7 755 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 RXFP1Q9HBX9 757 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 CTNND2Q9UQB3 1225 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.74■□□□□ 0.43
RNF43-206ENST00000582293 TSC2P49815 1807 aa17.74■□□□□ 0.43
RNF43-206ENST00000582293 M0QZQ0 153 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 PSMA7O14818 248 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 ITGB3P05106 788 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 URODP06132 367 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 POLR2BP30876 1174 aaKnown RBP17.73■□□□□ 0.43
RNF43-206ENST00000582293 LRRC63Q05C16 580 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 ADAM15Q13444 863 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 DPCR1Q3MIW9 517 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 RIN2Q8WYP3 895 aaPredicted RBP17.73■□□□□ 0.43
RNF43-206ENST00000582293 PIK3R5Q8WYR1 880 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 TTPALQ9BTX7 342 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 TLE6Q9H808 572 aa17.73■□□□□ 0.43
RNF43-206ENST00000582293 MRPL17Q9NRX2 175 aaKnown RBP17.73■□□□□ 0.43
RNF43-206ENST00000582293 PLXNA3P51805 1871 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 TULP1O00294 542 aaPredicted RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 TEX28O15482 410 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 ADAM12O43184 909 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 CST3P01034 146 aaPredicted RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 TMEM191BP0C7N4 346 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 RPL17P18621 184 aaKnown RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 RPL13P26373 211 aaKnown RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 PPP1R2P41236 205 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 STX17P56962 302 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 DLX2Q07687 328 aaPredicted RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 ELAVL2Q12926 359 aaKnown RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 STIM1Q13586 685 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 MRPL58Q14197 206 aaKnown RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 DUOXA2Q1HG44 320 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 FOXR2Q6PJQ5 311 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 TRAPPC11Q7Z392 1133 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 CEP57Q86XR8 500 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 FAM186BQ8IYM0 893 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 EFHBQ8N7U6 833 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 TMC2Q8TDI7 906 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 SLC22A17Q8WUG5 538 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 CACTINQ8WUQ7 758 aaKnown RBP17.72■□□□□ 0.43
RNF43-206ENST00000582293 CLSTN3Q9BQT9 956 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 IGFLR1Q9H665 355 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 ITGA11Q9UKX5 1188 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 AGAP1Q9UPQ3 857 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 FRMD4BQ9Y2L6 1034 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 NUB1Q9Y5A7 615 aa17.72■□□□□ 0.43
RNF43-206ENST00000582293 TRAPPC3O43617 180 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 TBC1D4O60343 1298 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 TBX10O75333 385 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 C4BPAP04003 597 aaKnown RBP17.71■□□□□ 0.43
RNF43-206ENST00000582293 TNNI1P19237 187 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 PSMC2P35998 433 aaKnown RBP17.71■□□□□ 0.43
RNF43-206ENST00000582293 NLRP12P59046 1061 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 FKBP3Q00688 224 aaKnown RBP17.71■□□□□ 0.43
RNF43-206ENST00000582293 PAK1Q13153 545 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 TDRD10Q5VZ19 366 aaKnown RBP17.71■□□□□ 0.43
RNF43-206ENST00000582293 C15orf39Q6ZRI6 1047 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 CSGALNACT2Q8N6G5 542 aa17.71■□□□□ 0.43
RNF43-206ENST00000582293 PABPC5Q96DU9 382 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms