RNA–Protein interactions for RNA: ENST00000582232.1

GGA3-211, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-211ENST00000582232 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
GGA3-211ENST00000582232 ZBED2Q9BTP6 218 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 XPO4Q9C0E2 1151 aaKnown RBP12.4□□□□□ -0.42
GGA3-211ENST00000582232 XYLT2Q9H1B5 865 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 MMRN2Q9H8L6 949 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 GRPEL1Q9HAV7 217 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 GOLGA2P5Q9HBQ8 144 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 GBF1Q92538 1859 aa12.4□□□□□ -0.42
GGA3-211ENST00000582232 KIAA1671Q9BY89 1806 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 PES1O00541 588 aaKnown RBP12.39□□□□□ -0.43
GGA3-211ENST00000582232 PODXLO00592 558 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 TLL1O43897 1013 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 ALDH2P05091 517 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 PON1P27169 355 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 POLR2BP30876 1174 aaKnown RBP12.39□□□□□ -0.43
GGA3-211ENST00000582232 PIK3CAP42336 1068 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 AARSP49588 968 aaKnown RBP eCLIP12.39□□□□□ -0.43
GGA3-211ENST00000582232 MRE11P49959 708 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 CLCNKBP51801 687 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 TRPC3Q13507 836 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 PAN2Q504Q3 1202 aaKnown RBP12.39□□□□□ -0.43
GGA3-211ENST00000582232 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 TDHQ8IZJ6 230 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 SEMA4DQ92854 862 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 CLP1Q92989 425 aaKnown RBP12.39□□□□□ -0.43
GGA3-211ENST00000582232 MRFAP1L1Q96HT8 127 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 ZNF560Q96MR9 790 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 TRIM5Q9C035 493 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 PLCB1Q9NQ66 1216 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 GCNT4Q9P109 453 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 AGAP1Q9UPQ3 857 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 SIK3Q9Y2K2 1263 aa12.39□□□□□ -0.43
GGA3-211ENST00000582232 R3HCC1Q9Y3T6 440 aaKnown RBP12.39□□□□□ -0.43
GGA3-211ENST00000582232 LAMA2P24043 3122 aaKnown RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 CASTOR2A6NHX0 329 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 TULP1O00294 542 aaPredicted RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 NRP1O14786 923 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 PPEF2O14830 753 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 GALTP07902 379 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 KRT19P08727 400 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 LINC00271P0C7V0 271 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 LAG3P18627 525 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 TAF6P49848 677 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 BCAR1P56945 870 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 LILRA4P59901 499 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 MYL6P60660 151 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 SCARA3Q6AZY7 606 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 TRIM65Q6PJ69 517 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 CD300LGQ6UXG3 332 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 TMEM130Q8N3G9 435 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 FIBCD1Q8N539 461 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 HPDLQ96IR7 371 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 CRACR2AQ9BSW2 395 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 COLEC11Q9BWP8 271 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 IMPG2Q9BZV3 1241 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 INTS2Q9H0H0 1204 aaKnown RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 FAM124BQ9H5Z6 455 aaPredicted RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 GDAP2Q9NXN4 497 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 FBXL5Q9UKA1 691 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 FAN1Q9Y2M0 1017 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 PCDHA11Q9Y5I1 949 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
GGA3-211ENST00000582232 NLRC5Q86WI3 1866 aa12.38□□□□□ -0.43
GGA3-211ENST00000582232 A0A1W2PPC1 479 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 LRRN2O75325 713 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 EFEMP2O95967 443 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 FAM163BP0C2L3 166 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 SLC9A1P19634 815 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 RFX1P22670 979 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 OR1G1P47890 313 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 SLC11A1P49279 550 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 ALDH7A1P49419 539 aaKnown RBP12.37□□□□□ -0.43
GGA3-211ENST00000582232 ZNF75DP51815 510 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 NOP14P78316 857 aaKnown RBP12.37□□□□□ -0.43
GGA3-211ENST00000582232 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 SYCP1Q15431 976 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 ZNF699Q32M78 642 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 SV2CQ496J9 727 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 FIGNQ5HY92 759 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 WDR44Q5JSH3 913 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 KCNT2Q6UVM3 1135 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 CCDC150Q8NCX0 1101 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 FAM81BQ96LP2 452 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 NT5C1BQ96P26 610 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 SIX2Q9NPC8 291 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 AAASQ9NRG9 546 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 HCSTQ9UBK5 93 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 RWDD3Q9Y3V2 267 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 LAMA3Q16787 3333 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 ITIH6Q6UXX5 1313 aa12.37□□□□□ -0.43
GGA3-211ENST00000582232 GRXCR1A8MXD5 290 aa12.36□□□□□ -0.43
GGA3-211ENST00000582232 KPNA7A9QM74 516 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms