RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 SPTLC1O15269 473 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 SLC16A4O15374 487 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 TOM1L1O75674 476 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 SEC24AO95486 1093 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 LRG1P02750 347 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 MAGEA9P43362 315 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 SMTNP53814 917 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 SLC10A6Q3KNW5 377 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 PPM1JQ5JR12 505 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 HYIQ5T013 277 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 ZPBP2Q6X784 338 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 TMEM161BQ8NDZ6 487 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 ING5Q8WYH8 240 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 C18orf25Q96B23 403 aaPredicted RBP11.59□□□□□ -0.55
RFFL-209ENST00000581265 CLDN23Q96B33 292 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 ELSPBP1Q96BH3 223 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 ZBTB45Q96K62 511 aaPredicted RBP11.59□□□□□ -0.55
RFFL-209ENST00000581265 PLA2G2FQ9BZM2 168 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 CYP4F11Q9HBI6 524 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 LTB4R2Q9NPC1 389 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 SPATA6Q9NWH7 488 aaPredicted RBP11.59□□□□□ -0.55
RFFL-209ENST00000581265 FBXL5Q9UKA1 691 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 FBXO4Q9UKT5 387 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 NUB1Q9Y5A7 615 aa11.59□□□□□ -0.55
RFFL-209ENST00000581265 MYH15Q9Y2K3 1946 aa11.58□□□□□ -0.55
RFFL-209ENST00000581265 CEP250Q9BV73 2442 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 ZNF197O14709 1029 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 PLS3P13797 630 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 CD72P21854 359 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 ARPP19P56211 112 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 STRN3Q13033 797 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 UBXN2BQ14CS0 331 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 ACAP1Q15027 740 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 CTXN3Q4LDR2 81 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 RILPL1Q5EBL4 403 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 PRSS36Q5K4E3 855 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 ZBTB41Q5SVQ8 909 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 TANGO2Q6ICL3 276 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 SYT2Q8N9I0 419 aaPredicted RBP11.58□□□□□ -0.56
RFFL-209ENST00000581265 APPL2Q8NEU8 664 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 KCNN1Q92952 543 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 CORO1BQ9BR76 489 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 PLEKHA5Q9HAU0 1116 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 KCND2Q9NZV8 630 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 AFF4Q9UHB7 1163 aaKnown RBP11.58□□□□□ -0.56
RFFL-209ENST00000581265 GMEB2Q9UKD1 530 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 ACACBO00763 2458 aa11.58□□□□□ -0.56
RFFL-209ENST00000581265 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 FANCMQ8IYD8 2048 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 SHISA7A6NL88 538 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 NCAM2O15394 837 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 CLDN3O15551 220 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 OAZ2O95190 189 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 MAPTP10636 758 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 CEBPBP17676 345 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 RPS9P46781 194 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 SLC12A3P55017 1021 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 ATP2C1P98194 919 aaPredicted RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 CSTF1Q05048 431 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 MCL1Q07820 350 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 FZD5Q13467 585 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 NOLC1Q14978 699 aaKnown RBP eCLIP11.57□□□□□ -0.56
RFFL-209ENST00000581265 ZBTB6Q15916 424 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 FAM78AQ5JUQ0 283 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 CYP4A22Q5TCH4 519 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 ZNF280DQ6N043 979 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 ZNF852Q6ZMS4 543 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 TPRG1Q6ZUI0 275 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 DDX12PQ92771 950 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 NELL1Q92832 810 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 DNASE1L2Q92874 299 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 TCEAL4Q96EI5 215 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 TBC1D32Q96NH3 1257 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 PNMA5Q96PV4 448 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 OXCT2Q9BYC2 517 aaPredicted RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 ZFP14Q9HCL3 533 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 MRPS17Q9Y2R5 130 aaKnown RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 INSL5Q9Y5Q6 135 aa11.57□□□□□ -0.56
RFFL-209ENST00000581265 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.57□□□□□ -0.56
RFFL-209ENST00000581265 TTC26A0AVF1 554 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 H0YCG3 227 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 M0QZQ0 153 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 CLTAP09496 248 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 HARSP12081 509 aaKnown RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 CYP3A5P20815 502 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 FCARP24071 287 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 TARSP26639 723 aaKnown RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 MARCKSP29966 332 aaPredicted RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 LRPAP1P30533 357 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 MCM4P33991 863 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 CCR2P41597 374 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 EPHA5P54756 1037 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 ADCY1Q08828 1119 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 RAD51AP2Q09MP3 1159 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 ZRSR1Q15695 479 aaKnown RBP11.56□□□□□ -0.56
RFFL-209ENST00000581265 SEZ6Q53EL9 994 aa11.56□□□□□ -0.56
RFFL-209ENST00000581265 ARL6IP4Q66PJ3 421 aaKnown RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms