RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 TRIM59Q8IWR1 403 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 SLC35C1Q96A29 364 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TMEM169Q96HH4 297 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 CNOT6LQ96LI5 555 aaKnown RBP16.31■□□□□ 0.2
MKS1-210ENST00000581180 C11orf84Q9BUA3 381 aaPredicted RBP16.31■□□□□ 0.2
MKS1-210ENST00000581180 NAT10Q9H0A0 1025 aaKnown RBP16.31■□□□□ 0.2
MKS1-210ENST00000581180 SAMSN1Q9NSI8 373 aaKnown RBP16.31■□□□□ 0.2
MKS1-210ENST00000581180 ADAM28Q9UKQ2 775 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 ITGA11Q9UKX5 1188 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TSC2P49815 1807 aa16.31■□□□□ 0.2
MKS1-210ENST00000581180 TULP1O00294 542 aaPredicted RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 GRM6O15303 877 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 LPXNO60711 386 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 ITGB3P05106 788 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 GTF2H1P32780 548 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
MKS1-210ENST00000581180 ZNF165P49910 485 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 MYL5Q02045 173 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 UBE3AQ05086 875 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 CAMK1Q14012 370 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 IQCB1Q15051 598 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 CDKAL1Q5VV42 579 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 TDRD10Q5VZ19 366 aaKnown RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 LRSAM1Q6UWE0 723 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 SV2AQ7L0J3 742 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 DDX53Q86TM3 631 aaKnown RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 DHX40Q8IX18 779 aaKnown RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 HASPINQ8TF76 798 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 GDPD5Q8WTR4 605 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 HSD3B7Q9H2F3 369 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
MKS1-210ENST00000581180 LZTS1Q9Y250 596 aa16.3■□□□□ 0.2
MKS1-210ENST00000581180 TRANK1O15050 2925 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 RFXAPO00287 272 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 TADA2AO75478 443 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 VNN1O95497 513 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 CST3P01034 146 aaPredicted RBP16.29■□□□□ 0.2
MKS1-210ENST00000581180 DNAJB1P25685 340 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 BRCC3P46736 316 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 GCLMP48507 274 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 LILRA4P59901 499 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 ZNF445P59923 1031 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 RBP5P82980 135 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 GRIN2CQ14957 1233 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 FUT10Q6P4F1 479 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 AOPEPQ8N6M6 819 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 LRRC52Q8N7C0 313 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 POF1BQ8WVV4 589 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 GPR62Q9BZJ7 368 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 FANCLQ9NW38 375 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 AGAP1Q9UPQ3 857 aa16.29■□□□□ 0.2
MKS1-210ENST00000581180 SPTLC1O15269 473 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 CAVIN2O95810 425 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 KRT17Q04695 432 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 TIGD5Q53EQ6 642 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 DCAF17Q5H9S7 520 aaPredicted RBP16.28■□□□□ 0.2
MKS1-210ENST00000581180 TCERG1LQ5VWI1 586 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 KRT39Q6A163 491 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 TAS1R1Q7RTX1 841 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 FAM114A1Q8IWE2 563 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 HERC2P3Q9BVR0 1158 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 CBX8Q9HC52 389 aa16.28■□□□□ 0.2
MKS1-210ENST00000581180 MTCL1Q9Y4B5 1905 aaKnown RBP16.27■□□□□ 0.2
MKS1-210ENST00000581180 SF3B1O75533 1304 aaKnown RBP eCLIP16.27■□□□□ 0.2
MKS1-210ENST00000581180 SMTNL1A8MU46 457 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 M0QZQ0 153 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 FSCN2O14926 492 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 PMM2O15305 246 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 STX10O60499 249 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
MKS1-210ENST00000581180 SOD2P04179 222 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 KRT19P08727 400 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 ZNF18P17022 549 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 PAX3P23760 479 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 PNPLA4P41247 253 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 TAF6P49848 677 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 KCNH2Q12809 1159 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 ELAVL2Q12926 359 aaKnown RBP16.27■□□□□ 0.2
MKS1-210ENST00000581180 BIRC3Q13489 604 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 CBWD6Q4V339 395 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 HSP90AA4PQ58FG1 418 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 CBWD3Q5JTY5 395 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 CBWD5Q5RIA9 395 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 SUSD3Q96L08 255 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 ZNF560Q96MR9 790 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 LMAN2LQ9H0V9 348 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 XYLT2Q9H1B5 865 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 PRDM12Q9H4Q4 367 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 CHST7Q9NS84 486 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 STK39Q9UEW8 545 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 PUF60Q9UHX1 559 aaKnown RBP16.27■□□□□ 0.2
MKS1-210ENST00000581180 COQ4Q9Y3A0 265 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 NUB1Q9Y5A7 615 aa16.27■□□□□ 0.2
MKS1-210ENST00000581180 KCNJ18B7U540 433 aa16.26■□□□□ 0.19
MKS1-210ENST00000581180 I3L4J1 428 aa16.26■□□□□ 0.19
MKS1-210ENST00000581180 HLA-DRAP01903 254 aa16.26■□□□□ 0.19
MKS1-210ENST00000581180 FGFR3P22607 806 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms