RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ZMYM2Q9UBW7 1377 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 DDX11L8A8MPP1 907 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 PTGESO14684 152 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 CHADO15335 359 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 GAS7O60861 476 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 PSMD10O75832 226 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 C1QL1O75973 258 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 SEC24AO95486 1093 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 PRB1P04280 392 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 AXLP30530 894 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 KPNA1P52294 538 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 SPIRE1Q08AE8 756 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 FCHO2Q0JRZ9 810 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 SCAPQ12770 1279 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 LRCH2Q5VUJ6 765 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 NOTUMQ6P988 496 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 C1orf228Q6PIY5 440 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 CASC1Q6TDU7 716 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 MIER3Q7Z3K6 550 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 RALGPS2Q86X27 583 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 MICU3Q86XE3 530 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 SYNPOQ8N3V7 929 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 RNF149Q8NC42 400 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 ZSCAN18Q8TBC5 510 aaPredicted RBP8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 CSGALNACT1Q8TDX6 532 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 CCDC51Q96ER9 411 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 GLT8D2Q9H1C3 349 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 DHX33Q9H6R0 707 aaKnown RBP8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 GTSE1Q9NYZ3 720 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 ADAMTS9Q9P2N4 1935 aa8.54□□□□□ -1.04
SMARCE1-217ENST00000580654 TRIP11Q15643 1979 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 USP9XQ93008 2570 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 PTPRDP23468 1912 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 hCG_1984214I3L0E3 225 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ZNF197O14709 1029 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 B4GALT5O43286 388 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ERLIN2O94905 339 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ABLIM3O94929 683 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 LRG1P02750 347 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ARF4P18085 180 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 PTENP60484 403 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 FAM193AP78312 1265 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 IRX4P78413 519 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ROR1Q01973 937 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 HDAC1Q13547 482 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 TEAD2Q15562 447 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 UAP1L1Q3KQV9 507 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 PDXDC1Q6P996 788 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 PDZD4Q76G19 769 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 FERMT3Q86UX7 667 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 GPIHBP1Q8IV16 184 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 TMTC2Q8N394 836 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 CHCHD4Q8N4Q1 142 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ZNF713Q8N859 430 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 RDM1Q8NG50 284 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ZNF461Q8TAF7 563 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 HNRNPLLQ8WVV9 542 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 PSPC1Q8WXF1 523 aaKnown RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 CHFRQ96EP1 664 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 ZFYVE19Q96K21 471 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 TMEM87BQ96K49 555 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 JPH2Q9BR39 696 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 TEKT3Q9BXF9 490 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 WRAP73Q9P2S5 460 aaPredicted RBP8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 BACE2Q9Y5Z0 518 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 SLC12A7Q9Y666 1083 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 SHROOM3Q8TF72 1996 aa8.53□□□□□ -1.04
SMARCE1-217ENST00000580654 SPTA1P02549 2419 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 ESYT2A0FGR8 921 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 KHNYNO15037 678 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 NPTXRO95502 500 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 TKTP29401 623 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 MCM5P33992 734 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 EPHA5P54756 1037 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 MBTD1Q05BQ5 628 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 ELAVL2Q12926 359 aaKnown RBP8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 SLC8B1Q6J4K2 584 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 B4GALNT3Q6L9W6 998 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 FSTL4Q6MZW2 842 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 RAB44Q7Z6P3 723 aaPredicted RBP8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 PIP4P1Q86T03 277 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 SGMS1Q86VZ5 419 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 TCEAL8Q8IYN2 117 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 SHKBP1Q8TBC3 707 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 LRIG1Q96JA1 1093 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 CCDC136Q96JN2 1154 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 HHIPQ96QV1 700 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 ZMYND12Q9H0C1 365 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 CEP72Q9P209 647 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 PARP2Q9UGN5 583 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 SLC8A2Q9UPR5 921 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 INSL5Q9Y5Q6 135 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 CACNA1EQ15878 2313 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 PTPRBP23467 1997 aa8.52□□□□□ -1.05
SMARCE1-217ENST00000580654 CCDC194A0A1B0GVG4 234 aa8.51□□□□□ -1.05
SMARCE1-217ENST00000580654 I3L4J1 428 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms