RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 BIRC3Q13489 604 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 TRPC3Q13507 836 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 ANO6Q4KMQ2 910 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 TCERG1LQ5VWI1 586 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 CD300LGQ6UXG3 332 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 Q7L0L9 218 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 TMC7Q7Z402 723 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 VPS52Q8N1B4 723 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 MICAL1Q8TDZ2 1067 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 ZNF560Q96MR9 790 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 GPR62Q9BZJ7 368 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 TLR9Q9NR96 1032 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 SSX2IPQ9Y2D8 614 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 CITO14578 2027 aa16.79■□□□□ 0.28
SLC6A4-205ENST00000579221 TDRD15B5MCY1 1934 aaKnown RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 LPXNO60711 386 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 EFEMP2O95967 443 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 CST3P01034 146 aaPredicted RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 SOD2P04179 222 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 TRIM49P0CI25 452 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 TRIM49CP0CI26 452 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 DNAJB1P25685 340 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 POLR2BP30876 1174 aaKnown RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 TAF6P49848 677 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 MARSP56192 900 aaKnown RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 LILRA4P59901 499 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 MYO1EQ12965 1108 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 USP41Q3LFD5 358 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 SV2CQ496J9 727 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 DCAF17Q5H9S7 520 aaPredicted RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 C1orf220Q5T0J3 134 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 KIAA1841Q6NSI8 718 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 DSTYKQ6XUX3 929 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 SV2AQ7L0J3 742 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 TMEM130Q8N3G9 435 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 LRRC52Q8N7C0 313 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 C3orf58Q8NDZ4 430 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 MRPL38Q96DV4 380 aaKnown RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 BPIFA3Q9BQP9 254 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 HERC2P3Q9BVR0 1158 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 NGRNQ9NPE2 291 aaKnown RBP16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 SIX4Q9UIU6 781 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 NFE2L3Q9Y4A8 694 aa16.78■□□□□ 0.28
SLC6A4-205ENST00000579221 TRIOBPQ9H2D6 2365 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 ARHGEF37A1IGU5 675 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 SMTNL1A8MU46 457 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 PPEF2O14830 753 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CXCL14O95715 111 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CAVIN2O95810 425 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CTSAP10619 480 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 POU3F3P20264 500 aaPredicted RBP16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 IGFBP4P22692 258 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 IGFBP6P24592 240 aaPredicted RBP16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 ATICP31939 592 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 BRCC3P46736 316 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 GCLMP48507 274 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 ERVFC1P60507 584 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 MYL5Q02045 173 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 PPP3CAQ08209 521 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 ZACNQ401N2 412 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 TIGD5Q53EQ6 642 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 FAM171A1Q5VUB5 890 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 TAS1R1Q7RTX1 841 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CEP57Q86XR8 500 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CXorf38Q8TB03 319 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 FAM84AQ96KN4 292 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 SUSD3Q96L08 255 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 CDX2Q99626 313 aaPredicted RBP16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 TCF25Q9BQ70 676 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 MMRN2Q9H8L6 949 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 TMEM8AQ9HCN3 771 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 ENTPD7Q9NQZ7 604 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 MTMR10Q9NXD2 777 aa16.77■□□□□ 0.28
SLC6A4-205ENST00000579221 RALGAPA2Q2PPJ7 1873 aa16.77■□□□□ 0.27
SLC6A4-205ENST00000579221 KPNA7A9QM74 516 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 FSCN2O14926 492 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 MTIF2P46199 727 aaKnown RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 ZNF165P49910 485 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 SMC1AQ14683 1233 aaKnown RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 TDRD10Q5VZ19 366 aaKnown RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 KRT39Q6A163 491 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 IRF2BP1Q8IU81 584 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 TRIM59Q8IWR1 403 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 RNF168Q8IYW5 571 aaPredicted RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 SLC35C1Q96A29 364 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 HPDLQ96IR7 371 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 TTPALQ9BTX7 342 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 VN1R3Q9BXE9 311 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 ZBP1Q9H171 429 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 MRPL17Q9NRX2 175 aaKnown RBP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 CHST7Q9NS84 486 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 PCDHB8Q9UN66 801 aa16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.76■□□□□ 0.27
SLC6A4-205ENST00000579221 RANBP2P49792 3224 aaKnown RBP16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 I3L4J1 428 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 M0QZQ0 153 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 SYN3O14994 580 aa16.75■□□□□ 0.27
SLC6A4-205ENST00000579221 N4BP1O75113 896 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms