RNA–Protein interactions for RNA: ENST00000579040.5

SSH2-208, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-208ENST00000579040 CTXN3Q4LDR2 81 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 PABPC1LQ4VXU2 614 aaKnown RBP12.56□□□□□ -0.4
SSH2-208ENST00000579040 MAP4K3Q8IVH8 894 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 TCEAL8Q8IYN2 117 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 SIX5Q8N196 739 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 FLCNQ8NFG4 579 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 FGF13Q92913 245 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 HVCN1Q96D96 273 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 EPSTI1Q96J88 318 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 MSTO1Q9BUK6 570 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 OXCT2Q9BYC2 517 aaPredicted RBP12.56□□□□□ -0.4
SSH2-208ENST00000579040 ZHX3Q9H4I2 956 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 RPF1Q9H9Y2 349 aaKnown RBP12.56□□□□□ -0.4
SSH2-208ENST00000579040 AVENQ9NQS1 362 aaPredicted RBP12.56□□□□□ -0.4
SSH2-208ENST00000579040 SLC2A4RGQ9NR83 387 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 FBXL5Q9UKA1 691 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 NUMBLQ9Y6R0 609 aa12.56□□□□□ -0.4
SSH2-208ENST00000579040 TSC2P49815 1807 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 LACTBL1A8MY62 500 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 K7ELQ4 463 aaPredicted RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 M0QZQ0 153 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 PRRG1O14668 218 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 LRG1P02750 347 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 CFHP08603 1231 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 NPR3P17342 541 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 PAX3P23760 479 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 MARCKSP29966 332 aaPredicted RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
SSH2-208ENST00000579040 POU5F1Q01860 360 aaKnown RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 SLFN12LQ6IEE8 588 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 SLC39A4Q6P5W5 647 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 USP49Q70CQ1 688 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 DDX12PQ92771 950 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 ZSCAN16Q9H4T2 348 aaPredicted RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 DNMT3BQ9UBC3 853 aaKnown RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 CPSF3Q9UKF6 684 aaKnown RBP12.55□□□□□ -0.4
SSH2-208ENST00000579040 DERAQ9Y315 318 aa12.55□□□□□ -0.4
SSH2-208ENST00000579040 KRBA1A5PL33 1030 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 OAZ2O95190 189 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 RHOP08100 348 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 GAP43P17677 238 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 PTPN2P17706 415 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 NMT1P30419 496 aaKnown RBP12.54□□□□□ -0.4
SSH2-208ENST00000579040 ARPP19P56211 112 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 YWHAHQ04917 246 aaPredicted RBP12.54□□□□□ -0.4
SSH2-208ENST00000579040 SLC39A14Q15043 492 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 SPECC1Q5M775 1068 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 ZBTB41Q5SVQ8 909 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 SPATA1Q5VX52 437 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 RRAGBQ5VZM2 374 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 PHLDB3Q6NSJ2 640 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 CCDC73Q6ZRK6 1079 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 SFR1Q86XK3 245 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 NPAS3Q8IXF0 933 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 BEST2Q8NFU1 509 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 ITFG1Q8TB96 612 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 ATOH1Q92858 354 aaPredicted RBP12.54□□□□□ -0.4
SSH2-208ENST00000579040 PHOX2BQ99453 314 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 ASB7Q9H672 318 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 CYP4F11Q9HBI6 524 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 ARHGEF3Q9NR81 526 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 HCFC1R1Q9NWW0 138 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 GDE1Q9NZC3 331 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 AFF4Q9UHB7 1163 aaKnown RBP12.54□□□□□ -0.4
SSH2-208ENST00000579040 MTMR6Q9Y217 621 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 MRPS23Q9Y3D9 190 aaKnown RBP12.54□□□□□ -0.4
SSH2-208ENST00000579040 INSL5Q9Y5Q6 135 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
SSH2-208ENST00000579040 H0Y858 1186 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 ZNF197O14709 1029 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 STX6O43752 255 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 PPP1R37O75864 691 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 MICAL2O94851 1124 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 CPB1P15086 417 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 TYMPP19971 482 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 RFX1P22670 979 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 SPAG1Q07617 926 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 POSTNQ15063 836 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 ZC2HC1CQ53FD0 456 aaPredicted RBP12.53□□□□□ -0.4
SSH2-208ENST00000579040 JADE1Q6IE81 842 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 FAM173BQ6P4H8 233 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 PARM1Q6UWI2 310 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 SV2BQ7L1I2 683 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 DYMQ7RTS9 669 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 ZNF720Q7Z2F6 126 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 USP37Q86T82 979 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 CCDC105Q8IYK2 499 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 ELMOD1Q8N336 334 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 GPR152Q8TDT2 470 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 FGF14Q92915 247 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 CLIC6Q96NY7 704 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 C2CD2Q9Y426 696 aa12.53□□□□□ -0.4
SSH2-208ENST00000579040 MYMKA6NI61 221 aa12.52□□□□□ -0.41
SSH2-208ENST00000579040 OR6C75A6NL08 312 aa12.52□□□□□ -0.41
SSH2-208ENST00000579040 ANKRD63C9JTQ0 380 aa12.52□□□□□ -0.41
SSH2-208ENST00000579040 PROB1E7EW31 1015 aa12.52□□□□□ -0.41
SSH2-208ENST00000579040 PI15O43692 258 aa12.52□□□□□ -0.41
SSH2-208ENST00000579040 SEC24AO95486 1093 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms