RNA–Protein interactions for RNA: ENST00000578267.5

MPDU1-217, Transcript of mannose-P-dolichol utilization defect 1, human

TSL 3

Gene MPDU1, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MPDU1-217	ENST00000578267	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.46	□□□□□ -0.25
MPDU1-217	ENST00000578267	ITGA11	Q9UKX5	1188 aa		13.46	□□□□□ -0.25
MPDU1-217	ENST00000578267	PDCD11	Q14690	1871 aa	Known RBP	13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267		F8W810	466 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	PES1	O00541	588 aa	Known RBP	13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	GNA14	O95837	355 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	SOD2	P04179	222 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	LINC00271	P0C7V0	271 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	PNPLA4	P41247	253 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	BRCC3	P46736	316 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	TAF6	P49848	677 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	AP3M2	P53677	418 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	TYRO3	Q06418	890 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	ZCWPW2	Q504Y3	356 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	C9orf57	Q5W0N0	161 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	RBM23	Q86U06	439 aa	Known RBP	13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	METTL23	Q86XA0	190 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	FAM114A1	Q8IWE2	563 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	TMC2	Q8TDI7	906 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	RIN2	Q8WYP3	895 aa	Predicted RBP	13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	EMILIN2	Q9BXX0	1053 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	IMPG2	Q9BZV3	1241 aa		13.45	□□□□□ -0.26
MPDU1-217	ENST00000578267	ANK1	P16157	1881 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	PLXNA4	Q9HCM2	1894 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	COL4A4	P53420	1690 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	SYCE3	A1L190	88 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	LRRIQ3	A6PVS8	624 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267		I3L4J1	428 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	MAPK13	O15264	365 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	MEFV	O15553	781 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TPM2	P07951	284 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TRIM49	P0CI25	452 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TRIM49C	P0CI26	452 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	ODC1	P11926	461 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	ERCC5	P28715	1186 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	LRPAP1	P30533	357 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	PIK3CA	P42336	1068 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	MTIF2	P46199	727 aa	Known RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	WNT7B	P56706	349 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	NAB2	Q15742	525 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TTI2	Q6NXR4	508 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	PDXDC1	Q6P996	788 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TRAPPC11	Q7Z392	1133 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	FILIP1	Q7Z7B0	1213 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	GLYCTK	Q8IVS8	523 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	APPL2	Q8NEU8	664 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	OR5B17	Q8NGF7	314 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	PARD3B	Q8TEW8	1205 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	BCL7C	Q8WUZ0	217 aa	Predicted RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	AUTS2	Q8WXX7	1259 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	GUCD1	Q96NT3	240 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TTPAL	Q9BTX7	342 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	HERC2P3	Q9BVR0	1158 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	NSUN3	Q9H649	340 aa	Known RBP	13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TLE6	Q9H808	572 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	MARCH5	Q9NX47	278 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	LMCD1	Q9NZU5	365 aa		13.44	□□□□□ -0.26
MPDU1-217	ENST00000578267	TMEM189-UBE2V1	I3L0A0	370 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	HUS1	O60921	280 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	SRGAP2B	P0DMP2	458 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	PAX3	P23760	479 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	KLRC2	P26717	231 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	GCLM	P48507	274 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	ERVFC1	P60507	584 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	TNNC1	P63316	161 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	CREM	Q03060	361 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	CETN1	Q12798	172 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	ZBTB6	Q15916	424 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	CT47A1	Q5JQC4	288 aa	Predicted RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	RBM43	Q6ZSC3	357 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	C1orf127	Q8N9H9	656 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	ANKRD20A12P	Q8NF67	263 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	HPDL	Q96IR7	371 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	FAM84A	Q96KN4	292 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	B3GALT6	Q96L58	329 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	MMS19	Q96T76	1030 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	DUSP9	Q99956	384 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	GPR62	Q9BZJ7	368 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	GZF1	Q9H116	711 aa	Predicted RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	DNAJC25	Q9H1X3	360 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	MTCH2	Q9Y6C9	303 aa		13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	LAMA2	P24043	3122 aa	Known RBP	13.43	□□□□□ -0.26
MPDU1-217	ENST00000578267	BECN2	A8MW95	431 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	KPNA7	A9QM74	516 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267		H7C4K7	107 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	CYB561D2	O14569	222 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	PPEF2	O14830	753 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	IKBKB	O14920	756 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	CTSA	P10619	480 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	P4HA1	P13674	534 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	CDK11B	P21127	795 aa	Known RBP	13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	DNAJB1	P25685	340 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	TKT	P29401	623 aa	Known RBP	13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	IRS1	P35568	1242 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	NRIP1	P48552	1158 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	MXI1	P50539	228 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	ARPP19	P56211	112 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	LILRA4	P59901	499 aa		13.42	□□□□□ -0.26
MPDU1-217	ENST00000578267	TPM4	P67936	248 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms