RNA–Protein interactions for RNA: ENST00000577101.5

NDE1-212, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-212ENST00000577101 CCDC127Q96BQ5 260 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 DDX27Q96GQ7 796 aaKnown RBP10.59□□□□□ -0.71
NDE1-212ENST00000577101 UROC1Q96N76 676 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 GAS2L1Q99501 681 aaPredicted RBP10.59□□□□□ -0.71
NDE1-212ENST00000577101 TCF25Q9BQ70 676 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 COLEC11Q9BWP8 271 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 KIAA1586Q9HCI6 787 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 SLC38A7Q9NVC3 462 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 STXBP5LQ9Y2K9 1186 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 NME7Q9Y5B8 376 aa10.59□□□□□ -0.71
NDE1-212ENST00000577101 PTPRDP23468 1912 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 M0QZQ0 153 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 PER2O15055 1255 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 MAPK13O15264 365 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 TBC1D4O60343 1298 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 KIF20AO95235 890 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 ITGB3P05106 788 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 DLATP10515 647 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 RPL17P18621 184 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 POLR2BP30876 1174 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 RPL9P32969 192 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 LTBRP36941 435 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 LILRA4P59901 499 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 TFAMQ00059 246 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 DSG1Q02413 1049 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 DLX2Q07687 328 aaPredicted RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 PAK1Q13153 545 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 MRPL58Q14197 206 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 KLHL40Q2TBA0 621 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 CCDC183Q5T5S1 534 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 FAM171A1Q5VUB5 890 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 TDRD10Q5VZ19 366 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 CAVIN1Q6NZI2 390 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 FOXR2Q6PJQ5 311 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 TRAPPC11Q7Z392 1133 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 NT5DC4Q86YG4 428 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 WDR49Q8IV35 697 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 MRPL43Q8N983 215 aaKnown RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 BEST2Q8NFU1 509 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 LNX1Q8TBB1 728 aaPredicted RBP10.58□□□□□ -0.72
NDE1-212ENST00000577101 SUSD3Q96L08 255 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 TSPAN18Q96SJ8 248 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 IRAK3Q9Y616 596 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 DOCK6Q96HP0 2047 aa10.58□□□□□ -0.72
NDE1-212ENST00000577101 DENND4AQ7Z401 1863 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 NOTCH4Q99466 2003 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 C2CD2LO14523 706 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 PSMA7O14818 248 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 HCRTO43612 131 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 CLASP2O75122 1294 aaKnown RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 TADA2AO75478 443 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 CXCL14O95715 111 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 CNPP09543 421 aaKnown RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 FKBP3Q00688 224 aaKnown RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 KRT17Q04695 432 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 LRRC63Q05C16 580 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 BFSP1Q12934 665 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 NFKBIBQ15653 356 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 DUSP6Q16828 381 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 CTC1Q2NKJ3 1217 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 TMC7Q7Z402 723 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 LIMS2Q7Z4I7 341 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 RBM23Q86U06 439 aaKnown RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 FAM186BQ8IYM0 893 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 MICALL1Q8N3F8 863 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 TMC2Q8TDI7 906 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 SLC22A17Q8WUG5 538 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 PPM1EQ8WY54 764 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 KLHL5Q96PQ7 755 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 RTP3Q9BQQ7 232 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 CLSTN3Q9BQT9 956 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 MKNK1Q9BUB5 465 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 XYLT2Q9H1B5 865 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 HSD3B7Q9H2F3 369 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 NSUN3Q9H649 340 aaKnown RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 RXFP1Q9HBX9 757 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 RWDD2AQ9UIY3 292 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 AGAP1Q9UPQ3 857 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 TIMM13Q9Y5L4 95 aaPredicted RBP10.57□□□□□ -0.72
NDE1-212ENST00000577101 PRUNE2Q8WUY3 3088 aa10.57□□□□□ -0.72
NDE1-212ENST00000577101 SF3B1O75533 1304 aaKnown RBP eCLIP10.57□□□□□ -0.727e-9■■□□□ 13.5
NDE1-212ENST00000577101 XIRP2A4UGR9 3374 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.56□□□□□ -0.72
NDE1-212ENST00000577101 TEX28O15482 410 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 TBX10O75333 385 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 VNN2O95498 520 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 PSMC2P35998 433 aaKnown RBP10.56□□□□□ -0.72
NDE1-212ENST00000577101 NRIP1P48552 1158 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 GLUD2P49448 558 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 VAMP7P51809 220 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 SMC1AQ14683 1233 aaKnown RBP10.56□□□□□ -0.72
NDE1-212ENST00000577101 SURF1Q15526 300 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 ZACNQ401N2 412 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 CBWD6Q4V339 395 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 CBWD3Q5JTY5 395 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 CBWD5Q5RIA9 395 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.56□□□□□ -0.72
NDE1-212ENST00000577101 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 FILIP1Q7Z7B0 1213 aa10.56□□□□□ -0.72
NDE1-212ENST00000577101 OSTM1Q86WC4 334 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms