RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 SMYD5Q6GMV2 418 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TMCO2Q7Z6W1 182 aaPredicted RBP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 ZNF280BQ86YH2 543 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TTC39CQ8N584 583 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 COLGALT1Q8NBJ5 622 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 RNF214Q8ND24 703 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 HPDLQ96IR7 371 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 POP1Q99575 1024 aaKnown RBP13.39□□□□□ -0.27
CXCL16-204ENST00000575168 MMRN2Q9H8L6 949 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TUBGCP4Q9UGJ1 667 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 ADAM28Q9UKQ2 775 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 DSEQ9UL01 958 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
CXCL16-204ENST00000575168 TNRC18O15417 2968 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 NLRC5Q86WI3 1866 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 GBF1Q92538 1859 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 LINC01553A4QN01 128 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 PIRO00625 290 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 NRP1O14786 923 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 DDHD2O94830 711 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 CA3P07451 260 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 POLR2BP30876 1174 aaKnown RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 AFF1P51825 1210 aaKnown RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 YWHAEP62258 255 aaKnown RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 DLG4P78352 724 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 PPP3CAQ08209 521 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 NAB2Q15742 525 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 ZNF699Q32M78 642 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 ZNF667Q5HYK9 610 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 TDRD10Q5VZ19 366 aaKnown RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 LMBRD2Q68DH5 695 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 DSTYKQ6XUX3 929 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 METTL23Q86XA0 190 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 C1orf127Q8N9H9 656 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 APPL2Q8NEU8 664 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 OR5B17Q8NGF7 314 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 TIFAQ96CG3 184 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 OXCT2Q9BYC2 517 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 PBX4Q9BYU1 374 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 VPS16Q9H269 839 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 FAM124BQ9H5Z6 455 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 CWH43Q9H720 699 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 RAB20Q9NX57 234 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 LZTS1Q9Y250 596 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 PRG3Q9Y2Y8 225 aaPredicted RBP13.38□□□□□ -0.27
CXCL16-204ENST00000575168 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 DAAM1Q9Y4D1 1078 aa13.38□□□□□ -0.27
CXCL16-204ENST00000575168 LGALS16A8MUM7 142 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 GRXCR1A8MXD5 290 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 KPNA7A9QM74 516 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 MEFVO15553 781 aaPredicted RBP13.37□□□□□ -0.27
CXCL16-204ENST00000575168 LPXNO60711 386 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 HUS1O60921 280 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 FAM163BP0C2L3 166 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 ODC1P11926 461 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 DNAJB2P25686 324 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 SLC11A1P49279 550 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 CLCNKBP51801 687 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 UBASH3AP57075 661 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 ERVK-21P61565 698 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 CREMQ03060 361 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 UBXN1Q04323 297 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 EXOC3L4Q17RC7 722 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 PDE12Q6L8Q7 609 aaKnown RBP13.37□□□□□ -0.27
CXCL16-204ENST00000575168 KIAA1841Q6NSI8 718 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 C15orf39Q6ZRI6 1047 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 ENOSF1Q7L5Y1 443 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 DPH6Q7L8W6 267 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 PLEKHO2Q8TD55 490 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 IQCDQ96DY2 449 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 IGSF21Q96ID5 467 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 PCMTD1Q96MG8 357 aaPredicted RBP13.37□□□□□ -0.27
CXCL16-204ENST00000575168 VRTNQ9H8Y1 702 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 TAB2Q9NYJ8 693 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 PCDH10Q9P2E7 1040 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 DNAJB4Q9UDY4 337 aa13.37□□□□□ -0.27
CXCL16-204ENST00000575168 C5orf67F2Z3F1 127 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 SYN3O14994 580 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 RFX1P22670 979 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 TBXAS1P24557 533 aaPredicted RBP13.36□□□□□ -0.27
CXCL16-204ENST00000575168 LILRA4P59901 499 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 FANCCQ00597 558 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 PLCB2Q00722 1185 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 PLCB3Q01970 1234 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 SOX4Q06945 474 aaPredicted RBP13.36□□□□□ -0.27
CXCL16-204ENST00000575168 USP41Q3LFD5 358 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 C1orf220Q5T0J3 134 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 FMNL3Q8IVF7 1028 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 SLC39A11Q8N1S5 342 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 TMEM86AQ8N2M4 240 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 SUSD3Q96L08 255 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 NT5C1BQ96P26 610 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 NKX2-4Q9H2Z4 354 aa13.36□□□□□ -0.27
CXCL16-204ENST00000575168 GOLGA2P5Q9HBQ8 144 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms