RNA–Protein interactions for RNA: ENST00000573474.5

CCDC40-209, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 554 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-209ENST00000573474 RBAK-RBAKDNI3L0D1 243 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 CLSTN1O94985 981 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 STAU1O95793 577 aaKnown RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 EOMESO95936 686 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 CXCL10P02778 98 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 CLTBP09497 229 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 POLR2BP30876 1174 aaKnown RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 EIF4A3P38919 411 aaKnown RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 GUCY2FP51841 1108 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 MTF1Q14872 753 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 TDRD12Q587J7 1177 aaKnown RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 GLRA4Q5JXX5 417 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 AGMOQ6ZNB7 445 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 SLC24A5Q71RS6 500 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 FAM71AQ8IYT1 594 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 LPPQ93052 612 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 C18orf25Q96B23 403 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 ELMO3Q96BJ8 720 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 HPDLQ96IR7 371 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 RPS6KC1Q96S38 1066 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 NIF3L1Q9GZT8 377 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 KCND1Q9NSA2 647 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 SLC38A7Q9NVC3 462 aa14.7□□□□□ -0.06
CCDC40-209ENST00000573474 EPN1Q9Y6I3 576 aaPredicted RBP14.7□□□□□ -0.06
CCDC40-209ENST00000573474 RALGAPA2Q2PPJ7 1873 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ARL5CA6NH57 179 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 PTGESO14684 152 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 CCP110O43303 1012 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 EVI5O60447 810 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 NDUFA10O95299 355 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 PLEKP08567 350 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-209ENST00000573474 PNMA6AP0CW24 399 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-209ENST00000573474 P4HA1P13674 534 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ATF7P17544 494 aaPredicted RBP14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ANXA13P27216 316 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 CYP2C18P33260 490 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 USP8P40818 1118 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 CCL23P55773 120 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 MYO1EQ12965 1108 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ZNF667Q5HYK9 610 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 TOGARAM2Q6ZUX3 1019 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ZNF598Q86UK7 904 aaKnown RBP14.69□□□□□ -0.06
CCDC40-209ENST00000573474 GPIHBP1Q8IV16 184 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 LRRC52Q8N7C0 313 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 RNF169Q8NCN4 708 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 DBF4BQ8NFT6 615 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 LINC01599Q8WXQ3 324 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 SCLYQ96I15 445 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 PPP1R10Q96QC0 940 aaKnown RBP14.69□□□□□ -0.06
CCDC40-209ENST00000573474 GAD1Q99259 594 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 PPP1R12CQ9BZL4 782 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 WNT8AQ9H1J5 351 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 DEF6Q9H4E7 631 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 HAUS4Q9H6D7 363 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 RSAD1Q9HA92 442 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 TUBGCP4Q9UGJ1 667 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 CITO14578 2027 aa14.69□□□□□ -0.06
CCDC40-209ENST00000573474 ANO9A1A5B4 782 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 MEIS3P2A8K0S8 358 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 EIF3CLB5ME19 914 aaKnown RBP14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ENPP3O14638 875 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ZSCAN12O43309 604 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 AKR1B10O60218 316 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 THP07101 528 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 RFC2P35250 354 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 MLH1P40692 756 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 YWHAEP62258 255 aaKnown RBP14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ASTE1Q2TB18 679 aaPredicted RBP14.68□□□□□ -0.06
CCDC40-209ENST00000573474 C9orf57Q5W0N0 161 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 VPS36Q86VN1 386 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 CCAR2Q8N163 923 aaKnown RBP14.68□□□□□ -0.06
CCDC40-209ENST00000573474 TMEM130Q8N3G9 435 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 GSTCDQ8NEC7 633 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ZFP42Q96MM3 310 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 EIF3CQ99613 913 aaKnown RBP14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ARID3AQ99856 593 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 RNF19AQ9NV58 838 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 PPP2R2CQ9Y2T4 447 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 ADGRG1Q9Y653 693 aa14.68□□□□□ -0.06
CCDC40-209ENST00000573474 PIRO00625 290 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 INPPL1O15357 1258 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 CYP26A1O43174 497 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 OFD1O75665 1012 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 IPO7O95373 1038 aaKnown RBP14.67□□□□□ -0.06
CCDC40-209ENST00000573474 CCDC175P0C221 793 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 KRT5P13647 590 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
CCDC40-209ENST00000573474 IBSPP21815 317 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-209ENST00000573474 LRPAP1P30533 357 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 CLCN1P35523 988 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 PNPLA4P41247 253 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 ASPAP45381 313 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 KIF11P52732 1056 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 BPIFB4P59827 614 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 KRT83P78385 493 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 PTK2Q05397 1052 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 WDR72Q3MJ13 1102 aa14.67□□□□□ -0.06
CCDC40-209ENST00000573474 ZNF571Q7Z3V5 609 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-209ENST00000573474 C17orf53Q8N3J3 647 aaPredicted RBP14.67□□□□□ -0.06
CCDC40-209ENST00000573474 UBR7Q8N806 425 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms