RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 CCDC144AA2RUR9 1427 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 RIMS2Q9UQ26 1411 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 PLEKHG1Q9ULL1 1385 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 POLR1AO95602 1720 aaPredicted RBP5.32□□□□□ -1.56
NUP88-202ENST00000570937 LEFTY2O00292 366 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 NDUFS2O75306 463 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 PPFIA4O75335 1185 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 MYBL2P10244 700 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 NR4A1P22736 598 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 APOBEC3AP31941 199 aaPredicted RBP5.32□□□□□ -1.56
NUP88-202ENST00000570937 ABCB5Q2M3G0 1257 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 RRP12Q5JTH9 1297 aaKnown RBP5.32□□□□□ -1.56
NUP88-202ENST00000570937 AFMIDQ63HM1 303 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 SORCS2Q96PQ0 1159 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 ASPSCR1Q9BZE9 553 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 SENP6Q9GZR1 1112 aaPredicted RBP5.32□□□□□ -1.56
NUP88-202ENST00000570937 MMRN2Q9H8L6 949 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 SLC2A4RGQ9NR83 387 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 TMEM140Q9NV12 185 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 EIF2B4Q9UI10 523 aaKnown RBP5.32□□□□□ -1.56
NUP88-202ENST00000570937 FZD1Q9UP38 647 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 DNM3Q9UQ16 869 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 MRFAP1Q9Y605 127 aa5.32□□□□□ -1.56
NUP88-202ENST00000570937 IQGAP1P46940 1657 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 TMEM131LA2VDJ0 1609 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 TNKSO95271 1327 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 PNPLA7Q6ZV29 1317 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 GAGE12BA1L429 117 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 ANKRD62A6NC57 917 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 GAGE12HA6NDE8 117 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 TEX33O43247 280 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 SCAF4O95104 1147 aaKnown RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 SLPIP03973 132 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 ZSCAN20P17040 1043 aaPredicted RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 C5AR1P21730 350 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 ATP8B2P98198 1209 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 NHLH2Q02577 135 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 PCBP2Q15366 365 aaKnown RBP eCLIP5.31□□□□□ -1.56
NUP88-202ENST00000570937 ATXN7L2Q5T6C5 722 aaPredicted RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 METRNLQ641Q3 311 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 SEM1Q6ZVN7 128 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 GDF7Q7Z4P5 450 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 MRGPREQ86SM8 312 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 DRC7Q8IY82 874 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 FAM177A1Q8N128 213 aaPredicted RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 CPT1CQ8TCG5 803 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 NRG4Q8WWG1 115 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 HAS1Q92839 578 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 GPATCH3Q96I76 525 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 MRI1Q9BV20 369 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 MANSC1Q9H8J5 431 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 SAP30BPQ9UHR5 308 aaKnown RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 AJAP1Q9UKB5 411 aaPredicted RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 NOP58Q9Y2X3 529 aaKnown RBP5.31□□□□□ -1.56
NUP88-202ENST00000570937 TRPM2O94759 1503 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 ZFYVE9O95405 1425 aa5.31□□□□□ -1.56
NUP88-202ENST00000570937 PIK3R4Q99570 1358 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 NEURL4Q96JN8 1562 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 DRGXA6NNA5 263 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 AMY1AP04745 511 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 ADH4P08319 380 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 ZFP36P26651 326 aaKnown RBP5.3□□□□□ -1.56
NUP88-202ENST00000570937 PCSK1P29120 753 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 SLC16A1P53985 500 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 KLF10Q13118 480 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 MTM1Q13496 603 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 ACAP2Q15057 778 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 FAM102AQ5T9C2 384 aaPredicted RBP5.3□□□□□ -1.56
NUP88-202ENST00000570937 PPM1NQ8N819 430 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 RNF169Q8NCN4 708 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 CLIP3Q96DZ5 547 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 C7orf25Q9BPX7 421 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 ZNF768Q9H5H4 540 aaKnown RBP5.3□□□□□ -1.56
NUP88-202ENST00000570937 NRDE2Q9H7Z3 1164 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 HOMER2Q9NSB8 354 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 POGKQ9P215 609 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 INTUQ9ULD6 942 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 HS3ST4Q9Y661 456 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 SPHKAPQ2M3C7 1700 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 LTBP4Q8N2S1 1624 aa5.3□□□□□ -1.56
NUP88-202ENST00000570937 ANKRD30BQ9BXX2 1392 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 XPOTO43592 962 aaKnown RBP5.29□□□□□ -1.56
NUP88-202ENST00000570937 GPR32O75388 356 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 ITGB1P05556 798 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 ATP5JP18859 108 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 FPR1P21462 350 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 IBSPP21815 317 aaPredicted RBP5.29□□□□□ -1.56
NUP88-202ENST00000570937 ALDH1A3P47895 512 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 LRRC55Q6ZSA7 311 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 PLXDC1Q8IUK5 500 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 ZFPM1Q8IX07 1006 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 ULK2Q8IYT8 1036 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 RPUSD2Q8IZ73 545 aaKnown RBP5.29□□□□□ -1.56
NUP88-202ENST00000570937 FBXO18Q8NFZ0 1043 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 STON2Q8WXE9 905 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 LARP4BQ92615 738 aaKnown RBP5.29□□□□□ -1.56
NUP88-202ENST00000570937 DPF2Q92785 391 aa5.29□□□□□ -1.56
NUP88-202ENST00000570937 COA7Q96BR5 231 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms