RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 CCDC39Q9UFE4 941 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 FBXO2Q9UK22 296 aaPredicted RBP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 BACE2Q9Y5Z0 518 aa13.48□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZNF318Q5VUA4 2279 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 DENND4AQ7Z401 1863 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 SYN3O14994 580 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 CCL16O15467 120 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 MEFVO15553 781 aaPredicted RBP13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 PDGFBP01127 241 aaPredicted RBP13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 PIGRP01833 764 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 FSHRP23945 695 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 MCM4P33991 863 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 DDIT3P35638 169 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 VCPP55072 806 aaKnown RBP13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 NHLH1Q02575 133 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 PPP2R3AQ06190 1150 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 AXDND1Q5T1B0 1012 aaPredicted RBP13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 FAM173BQ6P4H8 233 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 TUBGCP4Q9UGJ1 667 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 POLIQ9UNA4 740 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 DUSP12Q9UNI6 340 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 SRPRBQ9Y5M8 271 aaKnown RBP13.47□□□□□ -0.25
CTDNEP1-205ENST00000570828 PLXNA3P51805 1871 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 H7C4K7 107 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 OGTO15294 1046 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 XPOTO43592 962 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 STX6O43752 255 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 UVSSAQ2YD98 709 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 RRAGBQ5VZM2 374 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 USP49Q70CQ1 688 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 GRASPQ7Z6J2 395 aaPredicted RBP13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 MAP4K3Q8IVH8 894 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 NXPE3Q969Y0 559 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 SUSD3Q96L08 255 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 CLIC6Q96NY7 704 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 MSTO1Q9BUK6 570 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 HAPLN2Q9GZV7 340 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 ZSCAN16Q9H4T2 348 aaPredicted RBP13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 RPF1Q9H9Y2 349 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 UBQLN1Q9UMX0 589 aaKnown RBP13.46□□□□□ -0.25
CTDNEP1-205ENST00000570828 TTC26A0AVF1 554 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 POU2F2P09086 479 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 NMT1P30419 496 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 AVPR2P30518 371 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ELF1P32519 619 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 TNFSF9P41273 254 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 GTF2BQ00403 316 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ROR1Q01973 937 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 SPAG1Q07617 926 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ENOX2Q16206 610 aaKnown RBP13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 PPP1R15BQ5SWA1 713 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 SLC8B1Q6J4K2 584 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZNF280DQ6N043 979 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 RSPO2Q6UXX9 243 aaPredicted RBP13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 CCDC73Q6ZRK6 1079 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 RTL10Q7L3V2 364 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 DYMQ7RTS9 669 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 APPL2Q8NEU8 664 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 RSAD2Q8WXG1 361 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 USP28Q96RU2 1077 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 FIZ1Q96SL8 496 aa13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
CTDNEP1-205ENST00000570828 A0A0B4J269 797 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 LACTBL1A8MY62 500 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 PRRG1O14668 218 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 FAM189A1O60320 539 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 LAMP2P13473 410 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 CYP3A5P20815 502 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 LRPAP1P30533 357 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 STAT6P42226 847 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 ARPP19P56211 112 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 NTHL1P78549 312 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 SLC39A14Q15043 492 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 CTXN3Q4LDR2 81 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 PABPC1LQ4VXU2 614 aaKnown RBP13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZBTB41Q5SVQ8 909 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 SV2BQ7L1I2 683 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 SFR1Q86XK3 245 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 HSCBQ8IWL3 235 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 CD302Q8IX05 232 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 ZNF461Q8TAF7 563 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 DDX12PQ92771 950 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 ST6GALNAC4Q9H4F1 302 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 SEL1LQ9UBV2 794 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 FBXL5Q9UKA1 691 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 CDH7Q9ULB5 785 aa13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 MORC2Q9Y6X9 1032 aaPredicted RBP13.44□□□□□ -0.26
CTDNEP1-205ENST00000570828 C2orf16Q68DN1 1984 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 WDR27A2RRH5 827 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 NARSO43776 548 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 LRG1P02750 347 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 HSP90AA1P07900 732 aaKnown RBP13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 GAP43P17677 238 aa13.43□□□□□ -0.26
CTDNEP1-205ENST00000570828 RFX1P22670 979 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms