RNA–Protein interactions for RNA: ENST00000569963.1

NAE1-222, Transcript of NEDD8 activating enzyme E1 subunit 1, human

TSL 2

Gene NAE1, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NAE1-222	ENST00000569963	CCDC183	Q5T5S1	534 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	FAM171A1	Q5VUB5	890 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	KIAA1841	Q6NSI8	718 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	INTS8	Q75QN2	995 aa	Known RBP	21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	USP37	Q86T82	979 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	MICALL1	Q8N3F8	863 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	C1orf127	Q8N9H9	656 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	CXorf38	Q8TB03	319 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	NELFB	Q8WX92	580 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	CCDC127	Q96BQ5	260 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	SUSD3	Q96L08	255 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	TTPAL	Q9BTX7	342 aa		21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	GZF1	Q9H116	711 aa	Predicted RBP	21.33	■■□□□ 1.01
NAE1-222	ENST00000569963	PTPRJ	Q12913	1337 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	DLAT	P10515	647 aa	Known RBP	21.32	■■□□□ 1
NAE1-222	ENST00000569963	TNNI1	P19237	187 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	BRCC3	P46736	316 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	NLRP12	P59046	1061 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	LILRA4	P59901	499 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	PAK1	Q13153	545 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	COL19A1	Q14993	1142 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	CCDC85B	Q15834	202 aa	Predicted RBP	21.32	■■□□□ 1
NAE1-222	ENST00000569963	KLHL10	Q6JEL2	608 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	TTI2	Q6NXR4	508 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	PDXDC1	Q6P996	788 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	FAM186B	Q8IYM0	893 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	TMEM130	Q8N3G9	435 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	OR5B17	Q8NGF7	314 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	PLEKHO2	Q8TD55	490 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	CEP63	Q96MT8	703 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	MTMR12	Q9C0I1	747 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	TLE6	Q9H808	572 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	RXFP1	Q9HBX9	757 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	21.32	■■□□□ 1
NAE1-222	ENST00000569963	PCDHGC5	Q9Y5F6	944 aa		21.32	■■□□□ 1
NAE1-222	ENST00000569963	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	TRIM49B	A6NDI0	452 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963		M0QZQ0	153 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	TULP1	O00294	542 aa	Predicted RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	IKBKB	O14920	756 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	SYN3	O14994	580 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	SLC16A3	O15427	465 aa	Known RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	CSPG5	O95196	566 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	PNPLA4	P41247	253 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	RBP5	P82980	135 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	CREM	Q03060	361 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	HYAL1	Q12794	435 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	DUSP6	Q16828	381 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	CT47A1	Q5JQC4	288 aa	Predicted RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	ADGRD2	Q7Z7M1	963 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	CSGALNACT2	Q8N6G5	542 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	LRRC52	Q8N7C0	313 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	AUTS2	Q8WXX7	1259 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	PIK3R5	Q8WYR1	880 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	BORCS6	Q96GS4	357 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	POP1	Q99575	1024 aa	Known RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	DUSP9	Q99956	384 aa	Known RBP	21.31	■■□□□ 1
NAE1-222	ENST00000569963	EMILIN2	Q9BXX0	1053 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	FNIP2	Q9P278	1114 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	RWDD2A	Q9UIY3	292 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	PCDHB8	Q9UN66	801 aa		21.31	■■□□□ 1
NAE1-222	ENST00000569963	PPEF2	O14830	753 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	ITGB3	P05106	788 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	KRT13	P13646	458 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	TAF6	P49848	677 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	VAMP7	P51809	220 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	RTP2	Q5QGT7	225 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	LMBRD2	Q68DH5	695 aa	Predicted RBP	21.3	■■□□□ 1
NAE1-222	ENST00000569963	TRAPPC11	Q7Z392	1133 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	FILIP1	Q7Z7B0	1213 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	CEP57	Q86XR8	500 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	EFHB	Q8N7U6	833 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	RIN2	Q8WYP3	895 aa	Predicted RBP	21.3	■■□□□ 1
NAE1-222	ENST00000569963	ZNF516	Q92618	1163 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	ZNF560	Q96MR9	790 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	DACH1	Q9UI36	760 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	SIX4	Q9UIU6	781 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	AGAP1	Q9UPQ3	857 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	CTNND2	Q9UQB3	1225 aa		21.3	■■□□□ 1
NAE1-222	ENST00000569963	ARHGEF37	A1IGU5	675 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	LRRIQ3	A6PVS8	624 aa	Predicted RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963		I3L4J1	428 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	C1R	P00736	705 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	EPB41	P11171	864 aa	Known RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963	POLR2B	P30876	1174 aa	Known RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963	NRIP1	P48552	1158 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	BFSP1	Q12934	665 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	CTC1	Q2NKJ3	1217 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	KLHL40	Q2TBA0	621 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	SV2C	Q496J9	727 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	ANKS3	Q6ZW76	656 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	APPL2	Q8NEU8	664 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	LNX1	Q8TBB1	728 aa	Predicted RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963	PPM1E	Q8WY54	764 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	SYAP1	Q96A49	352 aa	Predicted RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963	B3GALT6	Q96L58	329 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	KLHL5	Q96PQ7	755 aa		21.29	■■□□□ 1
NAE1-222	ENST00000569963	R3HCC1	Q9Y3T6	440 aa	Known RBP	21.29	■■□□□ 1
NAE1-222	ENST00000569963	C2CD2L	O14523	706 aa		21.28	■■□□□ 1
NAE1-222	ENST00000569963	SPTLC1	O15269	473 aa		21.28	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms