RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TPSD1Q9BZJ3 242 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 AGO4Q9HCK5 861 aaKnown RBP7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 OBP2AQ9NY56 170 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 NEDD4P46934 1319 aa7.43□□□□□ -1.22
HERPUD1-217ENST00000569429 ARID1BQ8NFD5 2236 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 FAM149AA5PLN7 773 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 MLH1P40692 756 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 P2RY2P41231 377 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 TNK2Q07912 1038 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 ELAVL2Q12926 359 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 HSP90AA2PQ14568 343 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 LMBRD2Q68DH5 695 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 TRMT1LQ7Z2T5 733 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 SMG8Q8ND04 991 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 GSTCDQ8NEC7 633 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 BAHD1Q8TBE0 780 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 CHFRQ96EP1 664 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 LIN37Q96GY3 246 aaPredicted RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 ZFP42Q96MM3 310 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 LRRC3BQ96PB8 259 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 MTRRQ9UBK8 725 aa7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 ATXN2Q99700 1313 aaKnown RBP7.42□□□□□ -1.22
HERPUD1-217ENST00000569429 MYOFQ9NZM1 2061 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CLEC18AA5D8T8 446 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 PLK4O00444 970 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 AFPP02771 609 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ATXN1LP0C7T5 689 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 GJA1P17302 382 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 HOXA11P31270 313 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ELF1P32519 619 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 AMPD2Q01433 879 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 SEMG2Q02383 582 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 KCNH2Q12809 1159 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 DRP2Q13474 957 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 TEAD2Q15562 447 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 C2orf27AQ580R0 203 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 IQCEQ6IPM2 695 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CLEC18BQ6UXF7 455 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ARMCX6Q7L4S7 300 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ARID3BQ8IVW6 561 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 SIRT2Q8IXJ6 389 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 FTSJ3Q8IY81 847 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 TCEAL8Q8IYN2 117 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 HS6ST3Q8IZP7 471 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CMTR1Q8N1G2 835 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CLEC18CQ8NCF0 446 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 MDGA1Q8NFP4 955 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ZNF461Q8TAF7 563 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 FGF11Q92914 225 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 GPATCH3Q96I76 525 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 SPACA7Q96KW9 195 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 PSMG3-AS1Q96PY0 264 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CDC6Q99741 560 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 FAM117AQ9C073 453 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 FBRSL1Q9HCM7 1045 aaKnown RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 TPCN1Q9ULQ1 816 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 GIT1Q9Y2X7 761 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 IPPQ9Y573 584 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 HEMK1Q9Y5R4 338 aaPredicted RBP7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 BACE2Q9Y5Z0 518 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 CDY1Q9Y6F8 540 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 TMEM131Q92545 1883 aa7.41□□□□□ -1.22
HERPUD1-217ENST00000569429 ABCA2Q9BZC7 2435 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ZNF316A6NFI3 1004 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 SPDYE3A6NKU9 549 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 DDX39AO00148 427 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 MEIS1O00470 390 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 DPYSL4O14531 572 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 DHX15O43143 795 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ABCB7O75027 752 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ABLIM3O94929 683 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 RLBP1P12271 317 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 UCNP55089 124 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 GRIK3Q13003 919 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 RTP5Q14D33 572 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 CEP55Q53EZ4 464 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 C6orf118Q5T5N4 469 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 IFIT1BQ5T764 474 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ANO7Q6IWH7 933 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ATG14Q6ZNE5 492 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 DBX2Q6ZNG2 339 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 TMPRSS12Q86WS5 348 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ELMOD1Q8N336 334 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 SHKBP1Q8TBC3 707 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 BPIFB1Q8TDL5 484 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 SNRNP27Q8WVK2 155 aaKnown RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 RABGGTAQ92696 567 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ZNF512Q96ME7 567 aaPredicted RBP7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 PAAF1Q9BRP4 392 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 SLITRK6Q9H5Y7 841 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 IFT122Q9HBG6 1241 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ASAH2Q9NR71 780 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 NRBP2Q9NSY0 501 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 ZSWIM5Q9P217 1185 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 PCDHA6Q9UN73 950 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 PCDHA8Q9Y5H6 950 aa7.4□□□□□ -1.22
HERPUD1-217ENST00000569429 CELSR1Q9NYQ6 3014 aa7.39□□□□□ -1.23
HERPUD1-217ENST00000569429 IGKV6-21A0A0C4DH24 114 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms