RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 ZNF785A8K8V0 405 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 DNAJB5O75953 348 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 SLC6A2P23975 617 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 HSPA7P48741 367 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 LINC00310P59036 64 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 BTKQ06187 659 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 RAPGEF1Q13905 1077 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 KRT72Q14CN4 511 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 MPEG1Q2M385 716 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 TMEM95Q3KNT9 176 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 CRB2Q5IJ48 1285 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 FAM26FQ5R3K3 315 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 SEM1Q6ZVN7 128 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 TMIEQ8NEW7 156 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 OR6B3Q8NGW1 331 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 KBTBD7Q8WVZ9 684 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 BRIP1Q9BX63 1249 aa6.98□□□□□ -1.29
UBR1-208ENST00000569066 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 PRSS23O95084 383 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 UNC5CO95185 931 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 NFYCQ13952 458 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 KIF22Q14807 665 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 ARL13BQ3SXY8 428 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 ZNF783Q6ZMS7 281 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 MPP5Q8N3R9 675 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 NKAPQ8N5F7 415 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 SHCBP1Q8NEM2 672 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 IL17RDQ8NFM7 739 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 OR56A3Q8NH54 315 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 NMD3Q96D46 503 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 TMEM176AQ96HP8 235 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 HERPUD2Q9BSE4 406 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 LSM14BQ9BX40 385 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 TRIM43BA6NCK2 446 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 C9orf118A6NHY6 69 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 EIF5BO60841 1220 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 CNOT4O95628 575 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 GNAI3P08754 354 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 IL1R1P14778 569 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 FGFR2P21802 821 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 GNAI1P63096 354 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 GALNT1Q10472 559 aaPredicted RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 MRPL49Q13405 166 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 MYCT1Q8N699 235 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 TRIM43Q96BQ3 446 aaPredicted RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 PACSIN1Q9BY11 444 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 DPH1Q9BZG8 443 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 C12orf65Q9H3J6 166 aaKnown RBP6.97□□□□□ -1.29
UBR1-208ENST00000569066 GSTO2Q9H4Y5 243 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 BRD9Q9H8M2 597 aa6.97□□□□□ -1.29
UBR1-208ENST00000569066 MROH6A6NGR9 719 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 RPL17P18621 184 aaKnown RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 ZNF135P52742 658 aaPredicted RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 UTP14CQ5TAP6 766 aaKnown RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 ZNF365Q70YC5 407 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 SLC15A4Q8N697 577 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 LINC01356Q8N9X3 169 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 ATP11CQ8NB49 1132 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 RABGGTAQ92696 567 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 LRRC37BQ96QE4 947 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 JADE2Q9NQC1 790 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 GNL3LQ9NVN8 582 aaKnown RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 PADI4Q9UM07 663 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 MAGED2Q9UNF1 606 aaPredicted RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 TEX33O43247 280 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 HOXA3O43365 443 aaPredicted RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 FGAP02671 866 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 TYRP1P17643 537 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 PDIA3P30101 505 aaKnown RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 ZNF568Q3ZCX4 644 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 UNC13DQ70J99 1090 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 LRRC46Q96FV0 321 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 TTLL2Q9BWV7 592 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 CPEB1Q9BZB8 566 aaKnown RBP6.96□□□□□ -1.3
UBR1-208ENST00000569066 ZDHHC8Q9ULC8 765 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 SLC4A7Q9Y6M7 1214 aa6.96□□□□□ -1.3
UBR1-208ENST00000569066 NPIPB6E9PJ23 425 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 E9PLN8 166 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 M0QYG6 137 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 CDC14BO60729 498 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 SLC43A1O75387 559 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 SLC11A2P49281 568 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 RENBPP51606 427 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 STARD3Q14849 445 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 KCNA10Q16322 511 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 SUCLG2Q96I99 432 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 SNX22Q96L94 193 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 VKORC1Q9BQB6 163 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 STK31Q9BXU1 1019 aa6.95□□□□□ -1.3
UBR1-208ENST00000569066 TBC1D4O60343 1298 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 NDST3O95803 873 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 MT-ND5P03915 603 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 ITGB1P05556 798 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 RARBP10826 455 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 MTHFD1P11586 935 aaKnown RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 UCP3P55916 312 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 RAC3P60763 192 aa6.94□□□□□ -1.3
UBR1-208ENST00000569066 PUM3Q15397 648 aaKnown RBP6.94□□□□□ -1.3
UBR1-208ENST00000569066 DCAF12L1Q5VU92 463 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms