RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	ALG13	Q9NP73	1137 aa	Known RBP	4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	KCNE5	Q9UJ90	142 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	IPP	Q9Y573	584 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	PCDHB1	Q9Y5F3	818 aa		4.07	□□□□□ -1.76
BBS4-215	ENST00000569001	SPATA31A6	Q5VVP1	1343 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	KLHL33	A6NCF5	533 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	TEX33	O43247	280 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	CD1A	P06126	327 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	ALAS1	P13196	640 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	VAV2	P52735	878 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	MC2R	Q01718	297 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	TAP1	Q03518	808 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	DACT2	Q5SW24	774 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	UTP14C	Q5TAP6	766 aa	Known RBP	4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	STRIP1	Q5VSL9	837 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001		Q6ZNX1	250 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	TSHZ1	Q6ZSZ6	1077 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	MIGA2	Q7L4E1	593 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	RD3	Q7Z3Z2	195 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	NECAB2	Q7Z6G3	386 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001		Q8NA96	180 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	SIMC1	Q8NDZ2	872 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	SSH3	Q8TE77	659 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	CLPTM1L	Q96KA5	538 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	COQ10A	Q96MF6	247 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	VRK1	Q99986	396 aa	Predicted RBP	4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	AIFM2	Q9BRQ8	373 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	IL17RB	Q9NRM6	502 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	TBCCD1	Q9NVR7	557 aa		4.06	□□□□□ -1.76
BBS4-215	ENST00000569001	MAST3	O60307	1309 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	TNKS	O95271	1327 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	HAUS5	O94927	633 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	IL12RB1	P42701	662 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	SIM1	P81133	766 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	CDC42EP1	Q00587	391 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	SF3B3	Q15393	1217 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	PTPN21	Q16825	1174 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	UAP1L1	Q3KQV9	507 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	CD300E	Q496F6	205 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	PRR16	Q569H4	304 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	ZNF362	Q5T0B9	420 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	GJC2	Q5T442	439 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	RNF187	Q5TA31	235 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	FBXO42	Q6P3S6	717 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	PNMA8A	Q86V59	439 aa	Predicted RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	ARHGEF25	Q86VW2	580 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	TMIE	Q8NEW7	156 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	NUP133	Q8WUM0	1156 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	HDAC10	Q969S8	669 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	BOD1	Q96IK1	185 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	LRIG1	Q96JA1	1093 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	MRGPRX4	Q96LA9	322 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	KLHL32	Q96NJ5	620 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	DMRTA2	Q96SC8	542 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	KIAA1586	Q9HCI6	787 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	MRPS18A	Q9NVS2	196 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	FAM30A	Q9NZY2	134 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	PTGFRN	Q9P2B2	879 aa		4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	SAP30BP	Q9UHR5	308 aa	Known RBP	4.05	□□□□□ -1.76
BBS4-215	ENST00000569001	MASP2	O00187	686 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	WAS	P42768	502 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	ZNF169	Q14929	603 aa	Predicted RBP	4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	SP5	Q6BEB4	398 aa	Predicted RBP	4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	PRIMA1	Q86XR5	153 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	BOLL	Q8N9W6	283 aa	Known RBP	4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	ACTRT2	Q8TDY3	377 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	COA7	Q96BR5	231 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	ZNF764	Q96H86	408 aa	Predicted RBP	4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	PNKP	Q96T60	521 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	IMPG2	Q9BZV3	1241 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	TMEM74B	Q9NUR3	256 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	FOXJ2	Q9P0K8	574 aa		4.04	□□□□□ -1.76
BBS4-215	ENST00000569001	TRGV11	A0A075B6L2	103 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	SHTN1	A0MZ66	631 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001		E9PLN8	166 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	ZNF37A	P17032	561 aa	Predicted RBP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	GATA3	P23771	443 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	PHKA1	P46020	1223 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	FXR1	P51114	621 aa	Known RBP eCLIP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	SLC16A1	P53985	500 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	MRPS35	P82673	323 aa	Known RBP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	TLE1	Q04724	770 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	KHDC1	Q4VXA5	237 aa	Known RBP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	PABPC1L	Q4VXU2	614 aa	Known RBP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	ARMC6	Q6NXE6	501 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	GADL1	Q6ZQY3	521 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	FAM43A	Q8N2R8	423 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	FAM98A	Q8NCA5	519 aa	Known RBP	4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	PDPR	Q8NCN5	879 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	SLC17A8	Q8NDX2	589 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	SLC30A5	Q8TAD4	765 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	TFAP2B	Q92481	460 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	LPIN2	Q92539	896 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	VKORC1	Q9BQB6	163 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	PACSIN1	Q9BY11	444 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	SLAMF7	Q9NQ25	335 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	ASB6	Q9NWX5	421 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	KCTD5	Q9NXV2	234 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	CTTNBP2NL	Q9P2B4	639 aa		4.03	□□□□□ -1.76
BBS4-215	ENST00000569001	TLK1	Q9UKI8	766 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms