RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 C9orf57Q5W0N0 161 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 LMBRD2Q68DH5 695 aaPredicted RBP14.09□□□□□ -0.15
CNOT1-213ENST00000568158 PALB2Q86YC2 1186 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 C12orf56Q8IXR9 622 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 XXYLT1Q8NBI6 393 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 SPATA20Q8TB22 786 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 GSDMAQ96QA5 445 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 APOL5Q9BWW9 433 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 KIAA1586Q9HCI6 787 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 DMAC2Q9NW81 257 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
CNOT1-213ENST00000568158 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
CNOT1-213ENST00000568158 C2CD2Q9Y426 696 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 HCFC2Q9Y5Z7 792 aa14.09□□□□□ -0.15
CNOT1-213ENST00000568158 ANO9A1A5B4 782 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 PIRO00625 290 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SPTLC1O15269 473 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 ADAM12O43184 909 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 TRAPPC3O43617 180 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 EXOC3O60645 756 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SPATA31D3P0C874 917 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 PRCPP42785 496 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 CASP4P49662 377 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SNRNP35Q16560 246 aaKnown RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 CAMK4Q16566 473 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 ZNF658Q5TYW1 1059 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 RSPO2Q6UXX9 243 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 TMEM184AQ6ZMB5 413 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SPATA31D4Q6ZUB0 917 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 GUF1Q8N442 669 aaKnown RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 CACTINQ8WUQ7 758 aaKnown RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 MSLNLQ96KJ4 702 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SUSD3Q96L08 255 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 POP1Q99575 1024 aaKnown RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 CLSTN3Q9BQT9 956 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 LMBRD1Q9NUN5 540 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 RMND1Q9NWS8 449 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 MAN1B1Q9UKM7 699 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 TIMM13Q9Y5L4 95 aaPredicted RBP14.08□□□□□ -0.16
CNOT1-213ENST00000568158 SCN1AP35498 2009 aa14.08□□□□□ -0.16
CNOT1-213ENST00000568158 KIF20AO95235 890 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 CLCN4P51793 760 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 LILRA4P59901 499 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 PSMD5Q16401 504 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 AAK1Q2M2I8 961 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 ANKRD54Q6NXT1 300 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 SYCE2Q6PIF2 218 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 DSTYKQ6XUX3 929 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 NT5DC4Q86YG4 428 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 GPR65Q8IYL9 337 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 CSGALNACT2Q8N6G5 542 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 GOLGA5Q8TBA6 731 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 FEZF2Q8TBJ5 459 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 PLEKHO2Q8TD55 490 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 PIK3R5Q8WYR1 880 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 ZNF516Q92618 1163 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 CASP10Q92851 521 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 MFSD14AQ96MC6 490 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 FNIP2Q9P278 1114 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 CD207Q9UJ71 328 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 AGAP1Q9UPQ3 857 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 TRAF3IP3Q9Y228 551 aa14.07□□□□□ -0.16
CNOT1-213ENST00000568158 GRXCR2A6NFK2 248 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 BIN1O00499 593 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 MBTPS2O43462 519 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 CALUO43852 315 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-213ENST00000568158 NR3C1P04150 777 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 ADH1AP07327 375 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 IL9P15248 144 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 OR1D2P34982 312 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 MRPL58Q14197 206 aaKnown RBP14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PSMD6Q15008 389 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 SURF1Q15526 300 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 VARS2Q5ST30 1063 aaKnown RBP14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PTCRAQ6ISU1 281 aaPredicted RBP14.06□□□□□ -0.16
CNOT1-213ENST00000568158 LILRA6Q6PI73 481 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PPFIBP1Q86W92 1011 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 C1orf127Q8N9H9 656 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 CCDC127Q96BQ5 260 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 BORCS6Q96GS4 357 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 SENP8Q96LD8 212 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 S1PR5Q9H228 398 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.06□□□□□ -0.16
CNOT1-213ENST00000568158 INTS13Q9NVM9 706 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PCDHB8Q9UN66 801 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 PLXNA3P51805 1871 aa14.06□□□□□ -0.16
CNOT1-213ENST00000568158 M0QZQ0 153 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 SYN3O14994 580 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 TGM5O43548 720 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 CST3P01034 146 aaPredicted RBP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 ITGB3P05106 788 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 TMEM191BP0C7N4 346 aa14.05□□□□□ -0.16
CNOT1-213ENST00000568158 DLATP10515 647 aaKnown RBP14.05□□□□□ -0.16
CNOT1-213ENST00000568158 CD44P16070 742 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms