RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 EDRF1Q3B7T1 1238 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 SCARA3Q6AZY7 606 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.62■□□□□ 0.57
COMMD4-220ENST00000567720 WDR49Q8IV35 697 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 CXorf38Q8TB03 319 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 MFSD14AQ96MC6 490 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 CGRRF1Q99675 332 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 TLE6Q9H808 572 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 MRPL17Q9NRX2 175 aaKnown RBP18.62■□□□□ 0.57
COMMD4-220ENST00000567720 INTS13Q9NVM9 706 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 DPP3Q9NY33 737 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 NUB1Q9Y5A7 615 aa18.62■□□□□ 0.57
COMMD4-220ENST00000567720 PPP1R3GB7ZBB8 358 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 TULP1O00294 542 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 PIRO00625 290 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 SPTLC1O15269 473 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 AKAP3O75969 853 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 ITGB3P05106 788 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 CNPP09543 421 aaKnown RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 TMEM191BP0C7N4 346 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 DLATP10515 647 aaKnown RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 FGFR3P22607 806 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 CTC1Q2NKJ3 1217 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 CEP135Q66GS9 1140 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 PRSS55Q6UWB4 352 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 ZC3H3Q8IXZ2 948 aaKnown RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 EFHBQ8N7U6 833 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 RIN2Q8WYP3 895 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 PIK3R5Q8WYR1 880 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 CCDC127Q96BQ5 260 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 PABPC5Q96DU9 382 aaKnown RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 SUSD3Q96L08 255 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 TTPALQ9BTX7 342 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 IGFLR1Q9H665 355 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 UBE2ZQ9H832 354 aaPredicted RBP18.61■□□□□ 0.57
COMMD4-220ENST00000567720 SIX4Q9UIU6 781 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 CTNND2Q9UQB3 1225 aa18.61■□□□□ 0.57
COMMD4-220ENST00000567720 PSMA7O14818 248 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 CLASP2O75122 1294 aaKnown RBP18.6■□□□□ 0.57
COMMD4-220ENST00000567720 POLR2BP30876 1174 aaKnown RBP18.6■□□□□ 0.57
COMMD4-220ENST00000567720 STIM1Q13586 685 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 KCNC3Q14003 757 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 BMS1Q14692 1282 aaKnown RBP18.6■□□□□ 0.57
COMMD4-220ENST00000567720 SURF1Q15526 300 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 KLHL10Q6JEL2 608 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 KIAA1841Q6NSI8 718 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 CEP57Q86XR8 500 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 EEF2KMTQ96G04 330 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 KLHL5Q96PQ7 755 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 POP1Q99575 1024 aaKnown RBP18.6■□□□□ 0.57
COMMD4-220ENST00000567720 CDCA3Q99618 268 aaPredicted RBP18.6■□□□□ 0.57
COMMD4-220ENST00000567720 RXFP1Q9HBX9 757 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 CLDND1Q9NY35 253 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 ITGA11Q9UKX5 1188 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 HCFC2Q9Y5Z7 792 aa18.6■□□□□ 0.57
COMMD4-220ENST00000567720 LRRIQ3A6PVS8 624 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-220ENST00000567720 M0QZQ0 153 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 TEX28O15482 410 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 TRAPPC3O43617 180 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 MBD3O95983 291 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 RPL17P18621 184 aaKnown RBP18.59■□□□□ 0.57
COMMD4-220ENST00000567720 CCNE1P24864 410 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 LTBRP36941 435 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 LILRA4P59901 499 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 LRRC63Q05C16 580 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 DLX2Q07687 328 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-220ENST00000567720 PSMD5Q16401 504 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 ANKRD40Q6AI12 368 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 GPR65Q8IYL9 337 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 LNX1Q8TBB1 728 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-220ENST00000567720 PARD3BQ8TEW8 1205 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 DHTKD1Q96HY7 919 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-220ENST00000567720 ANKRD36BP1Q96IX9 119 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 FNBP1Q96RU3 617 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 THEGQ9P2T0 379 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 FRMD4BQ9Y2L6 1034 aa18.59■□□□□ 0.57
COMMD4-220ENST00000567720 SYN3O14994 580 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 MAPK13O15264 365 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TNNI1P19237 187 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 PPP1R2P41236 205 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TAF6P49848 677 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 DLG4P78352 724 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TFF2Q03403 129 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 ADAM9Q13443 819 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 ADAM15Q13444 863 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 VARS2Q5ST30 1063 aaKnown RBP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TTI2Q6NXR4 508 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 LLGL2Q6P1M3 1020 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 RBM43Q6ZSC3 357 aaKnown RBP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 FAM186BQ8IYM0 893 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 CACTINQ8WUQ7 758 aaKnown RBP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 NELFBQ8WX92 580 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 ZNF516Q92618 1163 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 HLA-CQ95604 372 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 ZNF560Q96MR9 790 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 TSG101Q99816 390 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 EMILIN2Q9BXX0 1053 aa18.58■□□□□ 0.56
COMMD4-220ENST00000567720 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.58■□□□□ 0.56
COMMD4-220ENST00000567720 MTRRQ9UBK8 725 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms