RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SAAL1Q96ER3 474 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 ACCSQ96QU6 501 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 SCAND2PQ9GZW5 306 aaPredicted RBP14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 PLEKHA5Q9HAU0 1116 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 WDR6Q9NNW5 1121 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 ZDHHC7Q9NXF8 308 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 SEL1LQ9UBV2 794 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 CPSF3Q9UKF6 684 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 AGO2Q9UKV8 859 aaKnown RBP14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 SORCS3Q9UPU3 1222 aa14.81□□□□□ -0.04
VPS9D1-204ENST00000565023 XPOTO43592 962 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 FAM189A1O60320 539 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 N4BP1O75113 896 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 PRPF6O94906 941 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SCP2P22307 547 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 ABCD1P33897 745 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 ASIC1P78348 528 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 ROR1Q01973 937 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SIGLEC14Q08ET2 396 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 MTMR3Q13615 1198 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 RAB33AQ14088 237 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 CTXN3Q4LDR2 81 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SLFN12LQ6IEE8 588 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 DSTYKQ6XUX3 929 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 CCDC65Q8IXS2 484 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 ZDHHC14Q8IZN3 488 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 BEST2Q8NFU1 509 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 KCNN1Q92952 543 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 HVCN1Q96D96 273 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SUSD3Q96L08 255 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SPATA32Q96LK8 384 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 MYADMQ96S97 322 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 ST6GALNAC4Q9H4F1 302 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 EXOC7Q9UPT5 735 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 USTQ9Y2C2 406 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 BACE2Q9Y5Z0 518 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 TRIOO75962 3097 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 SCN1AP35498 2009 aa14.8□□□□□ -0.04
VPS9D1-204ENST00000565023 GOLGA8IPA6NC78 632 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 GOLGA8JA6NMD2 632 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 H7C4K7 107 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 SYN3O14994 580 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 POLR2DO15514 142 aaKnown RBP14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 PPP1R37O75864 691 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 PDGFBP01127 241 aaPredicted RBP14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 CASP1P29466 404 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 ELF1P32519 619 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 MRE11P49959 708 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 TMEM132DQ14C87 1099 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 E2F4Q16254 413 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 RESP18Q5W5W9 173 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 ZSWIM2Q8NEG5 633 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 RSAD2Q8WXG1 361 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 PCIF1Q9H4Z3 704 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 HCFC1R1Q9NWW0 138 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 FAM13BQ9NYF5 915 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 FBXL5Q9UKA1 691 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 PCDHB13Q9Y5F0 798 aa14.79□□□□□ -0.04
VPS9D1-204ENST00000565023 ZNF318Q5VUA4 2279 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 WDR27A2RRH5 827 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 PRRG1O14668 218 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 CPB1P15086 417 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 CYP3A5P20815 502 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 FSHRP23945 695 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 ADSSP30520 456 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 LRPAP1P30533 357 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 AFMP43652 599 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 CDR1P51861 262 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 ZBTB6Q15916 424 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 ZNF280DQ6N043 979 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 CYP26C1Q6V0L0 522 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 USP37Q86T82 979 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 SUGP1Q8IWZ8 645 aaKnown RBP14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 IQUBQ8NA54 791 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 GLIS3Q8NEA6 775 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 APPL2Q8NEU8 664 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 MFSD14AQ96MC6 490 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 FAM213AQ9BRX8 229 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 BLZF1Q9H2G9 400 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 TNMDQ9H2S6 317 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 CYP4F11Q9HBI6 524 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 OLFML3Q9NRN5 406 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 PCDHB8Q9UN66 801 aa14.78□□□□□ -0.04
VPS9D1-204ENST00000565023 XYLBO75191 536 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 C1RP00736 705 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 LRG1P02750 347 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 HNRNPA1P09651 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 OR4Q2P0C623 313 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 CMA1P23946 247 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 POSTNQ15063 836 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 SPATA1Q5VX52 437 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 CD302Q8IX05 232 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 ING5Q8WYH8 240 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 FAM84AQ96KN4 292 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 CBWD1Q9BRT8 395 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 STRA6Q9BX79 667 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 TRIM9Q9C026 710 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 LRRC27Q9C0I9 530 aa14.77□□□□□ -0.05
VPS9D1-204ENST00000565023 CUEDC2Q9H467 287 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms