RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	NT5C1B	Q96P26	610 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	NAA15	Q9BXJ9	866 aa	Known RBP	10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	MRPL9	Q9BYD2	267 aa	Known RBP	10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	IMPG2	Q9BZV3	1241 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	FAM207A	Q9NSI2	230 aa	Predicted RBP	10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	MIOS	Q9NXC5	875 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	CEP72	Q9P209	647 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	KANSL3	Q9P2N6	904 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	LRFN2	Q9ULH4	789 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	MYO6	Q9UM54	1294 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	LAMA3	Q16787	3333 aa		10.6	□□□□□ -0.71
SIN3A-205	ENST00000564778	MFAP3L	O75121	409 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	LRRN2	O75325	713 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	CST3	P01034	146 aa	Predicted RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	FGFR1	P11362	822 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	POLR2B	P30876	1174 aa	Known RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	RPL9	P32969	192 aa	Known RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	PNPLA4	P41247	253 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	FXR1	P51114	621 aa	Known RBP eCLIP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	EPHB4	P54760	987 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	JAM2	P57087	298 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	MYL6	P60660	151 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	APBA1	Q02410	837 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	TRPC3	Q13507	836 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	SGSM1	Q2NKQ1	1148 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	ZNF699	Q32M78	642 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	TMEM240	Q5SV17	173 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	C9orf57	Q5W0N0	161 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	SCARA3	Q6AZY7	606 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	PHLDB3	Q6NSJ2	640 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	ENOSF1	Q7L5Y1	443 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	TDH	Q8IZJ6	230 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	LRRC43	Q8N309	656 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	CCDC150	Q8NCX0	1101 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	HERVK_113	Q902F9	699 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	BAP1	Q92560	729 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	UROC1	Q96N76	676 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	CASD1	Q96PB1	797 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	NIF3L1	Q9GZT8	377 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	FAM124B	Q9H5Z6	455 aa	Predicted RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	APOBEC3G	Q9HC16	384 aa	Known RBP	10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	TBC1D13	Q9NVG8	400 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	CAPN11	Q9UMQ6	739 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	INPP5F	Q9Y2H2	1132 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	FHOD1	Q9Y613	1164 aa		10.59	□□□□□ -0.71
SIN3A-205	ENST00000564778	GOLGA6L6	A8MZA4	724 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	TMEM189-UBE2V1	I3L0A0	370 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	DGKI	O75912	1065 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	POMC	P01189	267 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	FGB	P02675	491 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	PAX3	P23760	479 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	TBXAS1	P24557	533 aa	Predicted RBP	10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	KCNJ6	P48051	423 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	AARS	P49588	968 aa	Known RBP eCLIP	10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	GSDMD	P57764	484 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	DEFB103A	P81534	67 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	ZBED6	P86452	979 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	WDR44	Q5JSH3	913 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	RASIP1	Q5U651	963 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	IQCE	Q6IPM2	695 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	ZNF365	Q70YC5	407 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	PPFIBP1	Q86W92	1011 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	CNGA4	Q8IV77	575 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	ARHGEF19	Q8IW93	802 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	DRC7	Q8IY82	874 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	ABI1	Q8IZP0	508 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	TMEM130	Q8N3G9	435 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	UBR7	Q8N806	425 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	SPC24	Q8NBT2	197 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	JAKMIP2	Q96AA8	810 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	DDX27	Q96GQ7	796 aa	Known RBP	10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	HPDL	Q96IR7	371 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	DNAJC7	Q99615	494 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	PI4K2A	Q9BTU6	479 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	GOLGA2P5	Q9HBQ8	144 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	PCDH10	Q9P2E7	1040 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	AGAP1	Q9UPQ3	857 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778	NUB1	Q9Y5A7	615 aa		10.58	□□□□□ -0.72
SIN3A-205	ENST00000564778		F8VZ95	297 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	RNF225	M0QZC1	329 aa	Predicted RBP	10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	TULP1	O00294	542 aa	Predicted RBP	10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	PODXL	O00592	558 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	PPEF2	O14830	753 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	B4GALT3	O60512	393 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	KRT19	P08727	400 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	TPM1	P09493	284 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	IBSP	P21815	317 aa	Predicted RBP	10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	HNRNPH3	P31942	346 aa	Known RBP	10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	CASP14	P31944	242 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	ASPA	P45381	313 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	TAF6	P49848	677 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	GATM	P50440	423 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	POLR2F	P61218	127 aa	Known RBP	10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	MYO1E	Q12965	1108 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	CUL2	Q13617	745 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	UPP1	Q16831	310 aa		10.57	□□□□□ -0.72
SIN3A-205	ENST00000564778	ZNF667	Q5HYK9	610 aa		10.57	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms