RNA–Protein interactions for RNA: ENST00000564678.1

HERPUD1-209, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 2,199 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-209ENST00000564678 LIG4P49917 911 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 BPIFB4P59827 614 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SLC7A5Q01650 507 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CNTN2Q02246 1040 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 PRKG1Q13976 671 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 PSMD6Q15008 389 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 TARBP2Q15633 366 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 COX20Q5RI15 118 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 TREML2Q5T2D2 321 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 C10orf62Q5T681 223 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 C11orf63Q6NUN7 778 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 C15orf39Q6ZRI6 1047 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ZNF677Q86XU0 584 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CELF2-AS1Q8N7Q2 184 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CCDC26Q8TAB7 109 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 WHAMMQ8TF30 809 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 PSPC1Q8WXF1 523 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SEMA4DQ92854 862 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 CCDC127Q96BQ5 260 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SAAL1Q96ER3 474 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 BICD1Q96G01 975 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 FAM167AQ96KS9 214 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 KREMEN1Q96MU8 473 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 KIFC3Q9BVG8 833 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 OSBPL7Q9BZF2 842 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 THAP2Q9H0W7 228 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SLITRK6Q9H5Y7 841 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ARNT2Q9HBZ2 717 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 EPB41L5Q9HCM4 733 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SEPT11Q9NVA2 429 aaKnown RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 SMARCAL1Q9NZC9 954 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 EFR3BQ9Y2G0 817 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 ADGRA3Q8IWK6 1321 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 A0A0G2JMZ2 1700 aa7.78□□□□□ -1.16
HERPUD1-209ENST00000564678 BHMG1C9JSJ3 638 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 K7ERI5 159 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DDNO94850 711 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 FARP2O94887 1054 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SGPL1O95470 568 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SYF2O95926 243 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GLI1P08151 1106 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ABCB4P21439 1286 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 STAT5BP51692 787 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SP4Q02446 784 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 CUL1Q13616 776 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 BLOC1S3Q6QNY0 202 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 METTL7BQ6UX53 244 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SEPT14Q6ZU15 432 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ERMP1Q7Z2K6 904 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 PACS2Q86VP3 889 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 MREGQ8N565 214 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6L1Q8N7Z2 621 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 FNBP1Q96RU3 617 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 KRT12Q99456 494 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DOCK5Q9H7D0 1870 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ZNF358Q9NW07 568 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 TAS2R14Q9NYV8 317 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 UVRAGQ9P2Y5 699 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 NOCTQ9UK39 431 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 AGO2Q9UKV8 859 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 KCNH4Q9UQ05 1017 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ATP8A1Q9Y2Q0 1164 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GSTTP1A0A1W2PQM5 241 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GOLGA6BA6NDN3 693 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SOWAHBA6NEL2 793 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 KRIT1O00522 736 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DDX3YO15523 660 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 CYP26A1O43174 497 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SART1O43290 800 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 OPA1O60313 960 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 MAFO75444 373 aaPredicted RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 CYP11B1P15538 503 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 HSPA6P17066 643 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 CHRNB2P17787 502 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 UBA1P22314 1058 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 IGFBP4P22692 258 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GLRA2P23416 452 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 EIF4BP23588 611 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 PDE6CP51160 858 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DNA2P51530 1060 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 EFNA5P52803 228 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 AP3M2P53677 418 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SOX10P56693 466 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 CDR2Q01850 454 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GUCY2DQ02846 1103 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 WDR44Q5JSH3 913 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 WDR78Q5VTH9 848 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 FASTKD5Q7L8L6 764 aaKnown RBP7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 C14orf80Q86SX3 495 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 NCAPG2Q86XI2 1143 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DNAAF5Q86Y56 855 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 GJD3Q8N144 294 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 UBL4BQ8N7F7 174 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 DEPTORQ8TB45 409 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 TAS1R2Q8TE23 839 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 SLC20A1Q8WUM9 679 aa7.77□□□□□ -1.17
HERPUD1-209ENST00000564678 ARHGEF26Q96DR7 871 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms