RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 UBE2TQ9NPD8 197 aaPredicted RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SEPT11Q9NVA2 429 aaKnown RBP7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RNF14Q9UBS8 474 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 AKT3Q9Y243 479 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GINS2Q9Y248 185 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CDY2AQ9Y6F7 541 aa7.99□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SMIM35A0A1B0GVV1 85 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TARSL2A2RTX5 802 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GRID2IPA4D2P6 1211 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZBBXA8MT70 800 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 K7ERI5 159 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TULP1O00294 542 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MAGEB2O15479 319 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NCK2O43639 380 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZC3H11AO75152 810 aaKnown RBP eCLIP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LRRN2O75325 713 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MAFO75444 373 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LDHAP00338 332 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 VTNP04004 478 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM253P0C7T8 217 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMOD1P28289 359 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 USP8P40818 1118 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MATR3P43243 847 aaKnown RBP eCLIP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NOP2P46087 812 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EFNA5P52803 228 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EPHB4P54760 987 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MRPS6P82932 125 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CAPSQ13938 189 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PSMD6Q15008 389 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MAP9Q49MG5 647 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MEI1Q5TIA1 1274 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 IER5Q5VY09 327 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PHLDB3Q6NSJ2 640 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ENOSF1Q7L5Y1 443 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TAS1R3Q7RTX0 852 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF572Q7Z3I7 529 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GLYCTKQ8IVS8 523 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZBTB8OSQ8IWT0 167 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RPUSD2Q8IZ73 545 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KRT222Q8N1A0 295 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PPM1KQ8N3J5 372 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 NOA1Q8NC60 698 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FBXL13Q8NEE6 735 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZSWIM2Q8NEG5 633 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SLC30A5Q8TAD4 765 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 LNX1Q8TBB1 728 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CTNNBL1Q8WYA6 563 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RFFLQ8WZ73 363 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RUBCNQ92622 972 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CALR3Q96L12 384 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FNBP1Q96RU3 617 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CDX2Q99626 313 aaPredicted RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 AGPAT1Q99943 283 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FAM213AQ9BRX8 229 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SYT11Q9BT88 431 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TLR10Q9BXR5 811 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GPR88Q9GZN0 384 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 EPC1Q9H2F5 836 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM134Q9H6X4 195 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 IL23AQ9NPF7 189 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C1orf112Q9NSG2 853 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 SALL4Q9UJQ4 1053 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 AGO2Q9UKV8 859 aaKnown RBP7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RAB21Q9UL25 225 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 COQ4Q9Y3A0 265 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TRPV2Q9Y5S1 764 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 STYXL1Q9Y6J8 313 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TNFRSF10AO00220 468 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FOXN3O00409 490 aaPredicted RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF185O15231 689 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CAND2O75155 1236 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZRANB2O95218 330 aaKnown RBP eCLIP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KIF4AO95239 1232 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 FTCDO95954 541 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 DLATP10515 647 aaKnown RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GHRP10912 638 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RFC2P35250 354 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PIK3CAP42336 1068 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PDE6CP51160 858 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GPC3P51654 580 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 GALCP54803 685 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C2orf54Q08AI8 447 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TFDP1Q14186 410 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MXD4Q14582 209 aaPredicted RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 RPS6KA1Q15418 735 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KIZQ2M2Z5 673 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CFAP221Q4G0U5 840 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 WDR44Q5JSH3 913 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 TMEM240Q5SV17 173 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 C9orf50Q5SZB4 431 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 WDR93Q6P2C0 686 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 PSRC1Q6PGN9 363 aaPredicted RBP7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 ZNF365Q70YC5 407 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 OTOP2Q7RTS6 562 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 CREG2Q8IUH2 290 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 KIAA0319LQ8IZA0 1049 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MMGT1Q8N4V1 131 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 USP38Q8NB14 1042 aa7.97□□□□□ -1.13
MAP1LC3B-205ENST00000564638 MAFAQ8NHW3 353 aaPredicted RBP7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms