RNA–Protein interactions for RNA: ENST00000564386.6

GCSH-203, Transcript of glycine cleavage system protein H, humanhuman

TSL 2

Gene GCSH, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCSH-203ENST00000564386 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.36■■□□□ 1.33
GCSH-203ENST00000564386 SLC22A17Q8WUG5 538 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 CACTINQ8WUQ7 758 aaKnown RBP23.36■■□□□ 1.33
GCSH-203ENST00000564386 SMARCE1Q969G3 411 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 SUSD3Q96L08 255 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 FBXL18Q96ME1 805 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 DZANK1Q9NVP4 752 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 XIRP2A4UGR9 3374 aa23.36■■□□□ 1.33
GCSH-203ENST00000564386 PDXKO00764 312 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 SYN3O14994 580 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 HOXB8P17481 243 aaPredicted RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 PAX3P23760 479 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 TKTP29401 623 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 CLCN4P51793 760 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 SMAD4Q13485 552 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 SNRNP35Q16560 246 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 ANKRD54Q6NXT1 300 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 PRSS55Q6UWB4 352 aaPredicted RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 TMEM130Q8N3G9 435 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 GUF1Q8N442 669 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 GTPBP4Q9BZE4 634 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 KCTD10Q9H3F6 313 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 DPP3Q9NY33 737 aa23.35■■□□□ 1.33
GCSH-203ENST00000564386 SPTBN5Q9NRC6 3674 aaKnown RBP23.35■■□□□ 1.33
GCSH-203ENST00000564386 TSC2P49815 1807 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 CALUO43852 315 aaPredicted RBP23.34■■□□□ 1.33
GCSH-203ENST00000564386 PRPF40AO75400 957 aaKnown RBP23.34■■□□□ 1.33
GCSH-203ENST00000564386 EPCAMP16422 314 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 TFAMQ00059 246 aaKnown RBP23.34■■□□□ 1.33
GCSH-203ENST00000564386 C9orf57Q5W0N0 161 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 ELMSAN1Q6PJG2 1045 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 CLEC17AQ6ZS10 378 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 ANKS3Q6ZW76 656 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 LNX1Q8TBB1 728 aaPredicted RBP23.34■■□□□ 1.33
GCSH-203ENST00000564386 PDE11AQ9HCR9 933 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 PCDHA5Q9Y5H7 936 aa23.34■■□□□ 1.33
GCSH-203ENST00000564386 ANO9A1A5B4 782 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 EXOC3O60645 756 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 GLUD1P00367 558 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 C1RP00736 705 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 BMP1P13497 986 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 RPL17P18621 184 aaKnown RBP23.33■■□□□ 1.33
GCSH-203ENST00000564386 WNT7BP56706 349 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 SLC9A9Q8IVB4 645 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 RDH13Q8NBN7 331 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 SMRP1Q8NCR6 262 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 APPL2Q8NEU8 664 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 SPATA20Q8TB22 786 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 MTRRQ9UBK8 725 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 DPP7Q9UHL4 492 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 PCDHB8Q9UN66 801 aa23.33■■□□□ 1.33
GCSH-203ENST00000564386 GRXCR2A6NFK2 248 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 SPDYE4A6NLX3 237 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 PIRO00625 290 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 MBTPS2O43462 519 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 TMEM191BP0C7N4 346 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 AARSP49588 968 aaKnown RBP eCLIP23.32■■□□□ 1.32
GCSH-203ENST00000564386 CYP24A1Q07973 514 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 ZNF658Q5TYW1 1059 aaPredicted RBP23.32■■□□□ 1.32
GCSH-203ENST00000564386 GLYCTKQ8IVS8 523 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 TMEM174Q8WUU8 243 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 ANKRD36BP1Q96IX9 119 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 ZNF560Q96MR9 790 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 GBP4Q96PP9 640 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 MAPK8IP1Q9UQF2 711 aa23.32■■□□□ 1.32
GCSH-203ENST00000564386 ARHGEF37A1IGU5 675 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 H7C4K7 107 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 M0QZQ0 153 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 PPEF2O14830 753 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 NR3C1P04150 777 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 LILRA4P59901 499 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 MYBPC2Q14324 1141 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 PSMD6Q15008 389 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 VARS2Q5ST30 1063 aaKnown RBP23.31■■□□□ 1.32
GCSH-203ENST00000564386 DSTYKQ6XUX3 929 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 WDR49Q8IV35 697 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 ERCC4Q92889 916 aaPredicted RBP23.31■■□□□ 1.32
GCSH-203ENST00000564386 FNBP1Q96RU3 617 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 CLSTN3Q9BQT9 956 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 INTS13Q9NVM9 706 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 DMAC2Q9NW81 257 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 ITGA11Q9UKX5 1188 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 TRAF3IP3Q9Y228 551 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 BACE2Q9Y5Z0 518 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 C2orf16Q68DN1 1984 aa23.31■■□□□ 1.32
GCSH-203ENST00000564386 TNNC2P02585 160 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 TAF6P49848 677 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 SYCE2Q6PIF2 218 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 PALB2Q86YC2 1186 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 SMYD4Q8IYR2 804 aaPredicted RBP23.3■■□□□ 1.32
GCSH-203ENST00000564386 MTMR12Q9C0I1 747 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 SFXN1Q9H9B4 322 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 MAN1C1Q9NR34 630 aa23.3■■□□□ 1.32
GCSH-203ENST00000564386 ITGB3P05106 788 aa23.29■■□□□ 1.32
GCSH-203ENST00000564386 ODC1P11926 461 aa23.29■■□□□ 1.32
GCSH-203ENST00000564386 IL9P15248 144 aa23.29■■□□□ 1.32
GCSH-203ENST00000564386 PNPLA4P41247 253 aa23.29■■□□□ 1.32
GCSH-203ENST00000564386 SMAD2Q15796 467 aaKnown RBP23.29■■□□□ 1.32
GCSH-203ENST00000564386 NFIL3Q16649 462 aa23.29■■□□□ 1.32
GCSH-203ENST00000564386 DUOXA2Q1HG44 320 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms