RNA–Protein interactions for RNA: ENST00000563901.5

SH3GL3-205, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-205ENST00000563901 SLC9A1P19634 815 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 KCNMA1Q12791 1236 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 FKBP15Q5T1M5 1219 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 SPOPLQ6IQ16 392 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 CHRDL2Q6WN34 429 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 CMTR2Q8IYT2 770 aaKnown RBP29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 TRIM5Q9C035 493 aa29.1■■■□□ 2.25
SH3GL3-205ENST00000563901 ANO9A1A5B4 782 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 PODXLO00592 558 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 LRPAP1P30533 357 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 TRPC3Q13507 836 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 LMO3Q8TAP4 145 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 HASPINQ8TF76 798 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 RAB20Q9NX57 234 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 PRG3Q9Y2Y8 225 aaPredicted RBP29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 COQ4Q9Y3A0 265 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 INSL6Q9Y581 213 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 PIRO00625 290 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 ITGB1P05556 798 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 OR1G1P47890 313 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 SLC11A1P49279 550 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 UPP1Q16831 310 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 RAD9AQ99638 391 aa29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 INTS2Q9H0H0 1204 aaKnown RBP29.09■■■□□ 2.25
SH3GL3-205ENST00000563901 NT5C1B-RDH14C9J2C7 533 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 CLSTN1O94985 981 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 BMP8BP34820 402 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 RBP5P82980 135 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 LRMPQ12912 555 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 SYCP1Q15431 976 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 GBP6Q6ZN66 633 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 XYLT2Q9H1B5 865 aa29.08■■■□□ 2.25
SH3GL3-205ENST00000563901 PMM2O15305 246 aa29.07■■■□□ 2.24
SH3GL3-205ENST00000563901 P4HA2O15460 535 aa29.07■■■□□ 2.24
SH3GL3-205ENST00000563901 EXOC3L4Q17RC7 722 aa29.07■■■□□ 2.24
SH3GL3-205ENST00000563901 SPOUT1Q5T280 376 aaKnown RBP29.07■■■□□ 2.24
SH3GL3-205ENST00000563901 APOBEC3GQ9HC16 384 aaKnown RBP29.07■■■□□ 2.24
SH3GL3-205ENST00000563901 SPTLC1O15269 473 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 ARHGEF15O94989 841 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 KIF4AO95239 1232 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 PON1P27169 355 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 BCAR1P56945 870 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 CD300LGQ6UXG3 332 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 TMEM173Q86WV6 379 aaPredicted RBP29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 EHBP1Q8NDI1 1231 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 HPDLQ96IR7 371 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 SIK3Q9Y2K2 1263 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 LAMA3Q16787 3333 aa29.06■■■□□ 2.24
SH3GL3-205ENST00000563901 GTPBP10A4D1E9 387 aaKnown RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 NRP1O14786 923 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 GALTP07902 379 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 PBX2P40425 430 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 ZNF75DP51815 510 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 CETN1Q12798 172 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 TRIM65Q6PJ69 517 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 TDHQ8IZJ6 230 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 SP7Q8TDD2 431 aaPredicted RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 RSPH1Q8WYR4 309 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 LSM14BQ9BX40 385 aaKnown RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 PRO3102Q9H379 93 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 CBFA2T2O43439 604 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 B3GAT3O94766 335 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 LINC00271P0C7V0 271 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 RPL9P32969 192 aaKnown RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 ZNF699Q32M78 642 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 DPY19L2P1Q6NXN4 242 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 GJB7Q6PEY0 223 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 SPRED2Q7Z698 418 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 FIBCD1Q8N539 461 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 BCL7CQ8WUZ0 217 aaPredicted RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 TATDN2Q93075 761 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 UROC1Q96N76 676 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 ERGIC2Q96RQ1 377 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 SIX2Q9NPC8 291 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 MARCH5Q9NX47 278 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 POLIQ9UNA4 740 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 R3HCC1Q9Y3T6 440 aaKnown RBP29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 NUB1Q9Y5A7 615 aa29.05■■■□□ 2.24
SH3GL3-205ENST00000563901 I3L4J1 428 aa29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 ASS1P00966 412 aaKnown RBP29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 NOP14P78316 857 aaKnown RBP29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 ARHGEF19Q8IW93 802 aa29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 PCMTD1Q96MG8 357 aaPredicted RBP29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 YBX2Q9Y2T7 364 aaKnown RBP29.04■■■□□ 2.24
SH3GL3-205ENST00000563901 EPHB6O15197 1021 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 PBX1P40424 430 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 BRCC3P46736 316 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 LILRA4P59901 499 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 LRRC52Q8N7C0 313 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 DDX27Q96GQ7 796 aaKnown RBP29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 TMEM175Q9BSA9 504 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 FAM207AQ9NSI2 230 aaPredicted RBP29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 NXF1Q9UBU9 619 aaKnown RBP29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 AJAP1Q9UKB5 411 aaPredicted RBP29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 FAN1Q9Y2M0 1017 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 TSC2P49815 1807 aa29.03■■■□□ 2.24
SH3GL3-205ENST00000563901 ALDH2P05091 517 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 TAF6P49848 677 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 SGSM1Q2NKQ1 1148 aa29.02■■■□□ 2.24
SH3GL3-205ENST00000563901 COLGALT1Q8NBJ5 622 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms