RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 CYP4F11Q9HBI6 524 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 TBC1D7Q9P0N9 293 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 DNMT3BQ9UBC3 853 aaKnown RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 CDH7Q9ULB5 785 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 CA14Q9ULX7 337 aa19.23■□□□□ 0.67
NME3-205ENST00000563854 TIMM13Q9Y5L4 95 aaPredicted RBP19.23■□□□□ 0.67
NME3-205ENST00000563854 A0A0B4J269 797 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 ANKRD63C9JTQ0 380 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 XPOTO43592 962 aaKnown RBP19.22■□□□□ 0.67
NME3-205ENST00000563854 CPB1P15086 417 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 STAT6P42226 847 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 ACOT2P49753 483 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 GTF2BQ00403 316 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 HTR4Q13639 388 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 STK38Q15208 465 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 CWF19L1Q69YN2 538 aaKnown RBP19.22■□□□□ 0.67
NME3-205ENST00000563854 ADALQ6DHV7 355 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 JADE1Q6IE81 842 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 SV2BQ7L1I2 683 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 ZNF461Q8TAF7 563 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 FGF13Q92913 245 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 PHOX2BQ99453 314 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 IKZF4Q9H2S9 585 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 ZSCAN16Q9H4T2 348 aaPredicted RBP19.22■□□□□ 0.67
NME3-205ENST00000563854 PCDHB8Q9UN66 801 aa19.22■□□□□ 0.67
NME3-205ENST00000563854 DOCK8Q8NF50 2099 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 MYMKA6NI61 221 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 H0Y858 1186 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 FAM189A1O60320 539 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 SRFP11831 508 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 IDEP14735 1019 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 LRPAP1P30533 357 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 ABCD1P33897 745 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 PDILTQ8N807 584 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 BEST2Q8NFU1 509 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 KCNN1Q92952 543 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 NXPE3Q969Y0 559 aa19.21■□□□□ 0.67
NME3-205ENST00000563854 MRPL44Q9H9J2 332 aaKnown RBP19.21■□□□□ 0.67
NME3-205ENST00000563854 CPSF3Q9UKF6 684 aaKnown RBP19.21■□□□□ 0.67
NME3-205ENST00000563854 MRPS23Q9Y3D9 190 aaKnown RBP19.21■□□□□ 0.67
NME3-205ENST00000563854 PPEF2O14830 753 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 HSP90AA1P07900 732 aaKnown RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 NFICP08651 508 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 CYP3A5P20815 502 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 YWHAHQ04917 246 aaPredicted RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 MRPL58Q14197 206 aaKnown RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 SLC39A14Q15043 492 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 ZBTB6Q15916 424 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 PARM1Q6UWI2 310 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 CCDC73Q6ZRK6 1079 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 USP37Q86T82 979 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 HSCBQ8IWL3 235 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 GPR152Q8TDT2 470 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 ATOH1Q92858 354 aaPredicted RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 FGF14Q92915 247 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 CORO1BQ9BR76 489 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 AGO2Q9UKV8 859 aaKnown RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 INSL5Q9Y5Q6 135 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 ZFP37Q9Y6Q3 630 aaPredicted RBP19.2■□□□□ 0.66
NME3-205ENST00000563854 DOCK6Q96HP0 2047 aa19.2■□□□□ 0.66
NME3-205ENST00000563854 A0A087X0B3 334 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 ANHXE9PGG2 379 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 GALR2O43603 387 aaPredicted RBP19.19■□□□□ 0.66
NME3-205ENST00000563854 TBC1D4O60343 1298 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 ABLIM3O94929 683 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 GCNT3O95395 438 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 SEC24AO95486 1093 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 RHOP08100 348 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 POU2F2P09086 479 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 OR4Q2P0C623 313 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 ATF2P15336 505 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 CLCN5P51795 746 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 ADCY1Q08828 1119 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 TMEM132DQ14C87 1099 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
NME3-205ENST00000563854 SLFN12LQ6IEE8 588 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
NME3-205ENST00000563854 RTL10Q7L3V2 364 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 ZNF720Q7Z2F6 126 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 NPAS3Q8IXF0 933 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 POMGNT1Q8WZA1 660 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 KXD1Q9BQD3 176 aa19.19■□□□□ 0.66
NME3-205ENST00000563854 RPP25Q9BUL9 199 aaKnown RBP19.19■□□□□ 0.66
NME3-205ENST00000563854 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.19■□□□□ 0.66
NME3-205ENST00000563854 KRBA1A5PL33 1030 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 PI15O43692 258 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 NPR3P17342 541 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 GAP43P17677 238 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 SLC5A9Q2M3M2 681 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 SPATA1Q5VX52 437 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 TPGS2Q68CL5 300 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 RNF19BQ6ZMZ0 732 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 MTSS1LQ765P7 747 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 CD302Q8IX05 232 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 ELMOD1Q8N336 334 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 NOC3LQ8WTT2 800 aaKnown RBP19.18■□□□□ 0.66
NME3-205ENST00000563854 HVCN1Q96D96 273 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 DNAJC19Q96DA6 116 aa19.18■□□□□ 0.66
NME3-205ENST00000563854 MCRS1Q96EZ8 462 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms