RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 PHACTR3Q96KR7 559 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 CFAP53Q96M91 514 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 FEZ1Q99689 392 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 CPEB1Q9BZB8 566 aaKnown RBP5.96□□□□□ -1.46
SMG1-206ENST00000562668 SPTLC3Q9NUV7 552 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 FZD1Q9UP38 647 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 PPP2R3BQ9Y5P8 575 aa5.96□□□□□ -1.46
SMG1-206ENST00000562668 A0A1W2PR48 441 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 PRSS38A1L453 326 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 DNAJC6O75061 913 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 RECQL4O94761 1208 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 ITGB1P05556 798 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 ADCYAP1R1P41586 468 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 SCNN1BP51168 640 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 MANFP55145 182 aaKnown RBP5.95□□□□□ -1.46
SMG1-206ENST00000562668 IL2P60568 153 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 DUSP2Q05923 314 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 MGAT5Q09328 741 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 MRPL49Q13405 166 aaKnown RBP5.95□□□□□ -1.46
SMG1-206ENST00000562668 MTHFSDQ2M296 383 aaKnown RBP5.95□□□□□ -1.46
SMG1-206ENST00000562668 NUP188Q5SRE5 1749 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 LAIR1Q6GTX8 287 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 LMBR1LQ6UX01 489 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 DOK3Q7L591 496 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 TAS1R1Q7RTX1 841 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 PNISRQ8TF01 805 aaKnown RBP5.95□□□□□ -1.46
SMG1-206ENST00000562668 RAPGEF4Q8WZA2 1011 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 MLST8Q9BVC4 326 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 WNT8AQ9H1J5 351 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 CICQ96RK0 1608 aaPredicted RBP5.95□□□□□ -1.46
SMG1-206ENST00000562668 PCDH11XQ9BZA7 1347 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 PCDH11YQ9BZA8 1340 aa5.95□□□□□ -1.46
SMG1-206ENST00000562668 UBR2Q8IWV8 1755 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 ANP32CO43423 234 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 KDM1AO60341 852 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 SCAF4O95104 1147 aaKnown RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 ABHD16AO95870 558 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 U2AF1L5P0DN76 240 aaPredicted RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 PRKAR2BP31323 418 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 GZMKP49863 264 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 U2AF1Q01081 240 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMG1-206ENST00000562668 COL10A1Q03692 680 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 FSTL1Q12841 308 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 AMOTQ4VCS5 1084 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 LY6G5CQ5SRR4 150 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 KCNV1Q6PIU1 500 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 FAM83AQ86UY5 434 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 C11orf74Q86VG3 221 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 PROKR1Q8TCW9 393 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 ZG16BQ96DA0 208 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 FAM193BQ96PV7 902 aaPredicted RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 LSM14BQ9BX40 385 aaKnown RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 EIF2B4Q9UI10 523 aaKnown RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.94□□□□□ -1.46
SMG1-206ENST00000562668 HS3ST4Q9Y661 456 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 MRPL42Q9Y6G3 142 aaKnown RBP5.94□□□□□ -1.46
SMG1-206ENST00000562668 NUMBLQ9Y6R0 609 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 ZNF831Q5JPB2 1677 aa5.94□□□□□ -1.46
SMG1-206ENST00000562668 CEMIPQ8WUJ3 1361 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 KDM3BQ7LBC6 1761 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 FKBP9O95302 570 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 PLEKHO1Q53GL0 409 aaPredicted RBP5.93□□□□□ -1.46
SMG1-206ENST00000562668 PLEKHG4Q58EX7 1191 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 DALRD3Q5D0E6 543 aaKnown RBP5.93□□□□□ -1.46
SMG1-206ENST00000562668 FRMD7Q6ZUT3 714 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 FKBP9P1Q75LS8 142 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 JAZF1Q86VZ6 243 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 DNAJC10Q8IXB1 793 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 RSAD2Q8WXG1 361 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 KCNH6Q9H252 994 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 TMPRSS11EQ9UL52 423 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 HDAC5Q9UQL6 1122 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 NUDCQ9Y266 331 aa5.93□□□□□ -1.46
SMG1-206ENST00000562668 TAF1LQ8IZX4 1826 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 COL5A3P25940 1745 aaPredicted RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 TJP1Q07157 1748 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 PPFIA2O75334 1257 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 LTA4HP09960 611 aaKnown RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 ZFP36P26651 326 aaKnown RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 MEF2AQ02078 507 aaPredicted RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 PTPAQ15257 358 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 MBNL2Q5VZF2 373 aaKnown RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 IQSEC1Q6DN90 963 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 ZNF530Q6P9A1 599 aaPredicted RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 ZNF575Q86XF7 245 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 IL17REQ8NFR9 667 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 CAMKK2Q96RR4 588 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 NDC1Q9BTX1 674 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 SLC46A2Q9BY10 475 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 EMC7Q9NPA0 242 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 EVLQ9UI08 416 aaPredicted RBP5.92□□□□□ -1.46
SMG1-206ENST00000562668 PRSS50Q9UI38 385 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 KCPQ6ZWJ8 1503 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 MAP3K5Q99683 1374 aa5.92□□□□□ -1.46
SMG1-206ENST00000562668 TUBGCP6Q96RT7 1819 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 GRID2IPA4D2P6 1211 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 GSG1L2A8MUP6 293 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 CCER2I3L3R5 266 aa5.91□□□□□ -1.46
SMG1-206ENST00000562668 RNMTO43148 476 aaKnown RBP5.91□□□□□ -1.46
SMG1-206ENST00000562668 PRAMEF4O60810 478 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms