RNA–Protein interactions for RNA: ENST00000561568.5

USB1-204, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 671 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-204ENST00000561568 ITGB3P05106 788 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 CCDC192P0DO97 292 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 CTSAP10619 480 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 GTF2H1P32780 548 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 GUCY2FP51841 1108 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 LILRA4P59901 499 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 ERVFC1P60507 584 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 FAM171A1Q5VUB5 890 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 RNF168Q8IYW5 571 aaPredicted RBP17.66■□□□□ 0.42
USB1-204ENST00000561568 C1orf127Q8N9H9 656 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 OR5B17Q8NGF7 314 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 PLEKHO2Q8TD55 490 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 TCF25Q9BQ70 676 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 MTMR12Q9C0I1 747 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 NAT10Q9H0A0 1025 aaKnown RBP17.66■□□□□ 0.42
USB1-204ENST00000561568 GZF1Q9H116 711 aaPredicted RBP17.66■□□□□ 0.42
USB1-204ENST00000561568 CHST7Q9NS84 486 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 MTCH2Q9Y6C9 303 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 NLRC5Q86WI3 1866 aa17.66■□□□□ 0.42
USB1-204ENST00000561568 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 C4BPAP04003 597 aaKnown RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 KRT19P08727 400 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 TAF6P49848 677 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 DLG4P78352 724 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 TYRO3Q06418 890 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 MYO1EQ12965 1108 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 TRPC3Q13507 836 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 ADGRE1Q14246 886 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 CCDC40Q4G0X9 1142 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 LMBRD2Q68DH5 695 aaPredicted RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 PDXDC1Q6P996 788 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 TAS1R1Q7RTX1 841 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 LRRC52Q8N7C0 313 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 MRPL43Q8N983 215 aaKnown RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 C3orf58Q8NDZ4 430 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 ENOX1Q8TC92 643 aaKnown RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 HASPINQ8TF76 798 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 MYLIPQ8WY64 445 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 PPP2R3CQ969Q6 453 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 SUSD3Q96L08 255 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 MED15Q96RN5 788 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 ENTPD7Q9NQZ7 604 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 MRPL17Q9NRX2 175 aaKnown RBP17.65■□□□□ 0.42
USB1-204ENST00000561568 IRAK3Q9Y616 596 aa17.65■□□□□ 0.42
USB1-204ENST00000561568 FSCN2O14926 492 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 SYN3O14994 580 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 CST3P01034 146 aaPredicted RBP17.64■□□□□ 0.41
USB1-204ENST00000561568 FOSL2P15408 326 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 POLR2BP30876 1174 aaKnown RBP17.64■□□□□ 0.41
USB1-204ENST00000561568 MARSP56192 900 aaKnown RBP17.64■□□□□ 0.41
USB1-204ENST00000561568 DSG1Q02413 1049 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 SV2CQ496J9 727 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 TIGD5Q53EQ6 642 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 KIAA0319Q5VV43 1072 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 DSTYKQ6XUX3 929 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.64■□□□□ 0.41
USB1-204ENST00000561568 SV2AQ7L0J3 742 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 CEP57Q86XR8 500 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 CXorf38Q8TB03 319 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 ZNF560Q96MR9 790 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 TTPALQ9BTX7 342 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 HERC2P3Q9BVR0 1158 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 VN1R3Q9BXE9 311 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 ZBP1Q9H171 429 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 THAP9Q9H5L6 903 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 MYO9BQ13459 2157 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 PTPRJQ12913 1337 aa17.64■□□□□ 0.41
USB1-204ENST00000561568 KPNA7A9QM74 516 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 M0QZQ0 153 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 URODP06132 367 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 FGFR3P22607 806 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 IGFBP6P24592 240 aaPredicted RBP17.63■□□□□ 0.41
USB1-204ENST00000561568 ATICP31939 592 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 BRCC3P46736 316 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 GLUD2P49448 558 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 AARSP49588 968 aaKnown RBP eCLIP17.63■□□□□ 0.41
USB1-204ENST00000561568 BIRC3Q13489 604 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 ZACNQ401N2 412 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 C1orf220Q5T0J3 134 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 TCERG1LQ5VWI1 586 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 FAM114A1Q8IWE2 563 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 NSUN3Q9H649 340 aaKnown RBP17.63■□□□□ 0.41
USB1-204ENST00000561568 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.63■□□□□ 0.41
USB1-204ENST00000561568 SIX4Q9UIU6 781 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 KIAA1671Q9BY89 1806 aa17.63■□□□□ 0.41
USB1-204ENST00000561568 SYCE3A1L190 88 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 PPEF2O14830 753 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 LILRB3O75022 631 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 IRS1P35568 1242 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 CREMQ03060 361 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 SGSM1Q2NKQ1 1148 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 KRT39Q6A163 491 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 C15orf39Q6ZRI6 1047 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 ANKS3Q6ZW76 656 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 CREBRFQ8IUR6 639 aa17.62■□□□□ 0.41
USB1-204ENST00000561568 TMEM130Q8N3G9 435 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms