RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 KIF26AQ9ULI4 1882 aaPredicted RBP18.71■□□□□ 0.59
CDC42BPB-208ENST00000561271 COL4A3Q01955 1670 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 PPEF2O14830 753 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 SPTLC2O15270 562 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 NFICP08651 508 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 IDEP14735 1019 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 GAP43P17677 238 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 FSHRP23945 695 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 LRPAP1P30533 357 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ACOT2P49753 483 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 TDGQ13569 410 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZBTB6Q15916 424 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 JADE1Q6IE81 842 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 SLC8B1Q6J4K2 584 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZNF280DQ6N043 979 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZNF720Q7Z2F6 126 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 SPRYD3Q8NCJ5 442 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ST13P5Q8NFI4 369 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 HVCN1Q96D96 273 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZNF396Q96N95 335 aaPredicted RBP18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 HCFC1R1Q9NWW0 138 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 SEL1LQ9UBV2 794 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 DUSP12Q9UNI6 340 aa18.7■□□□□ 0.58
CDC42BPB-208ENST00000561271 PTPRDP23468 1912 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 NARSO43776 548 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 TBC1D4O60343 1298 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 XYLBO75191 536 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 CYP3A5P20815 502 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 CASP5P51878 434 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 KCNA1Q09470 495 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 CTXN3Q4LDR2 81 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 IER5LQ5T953 404 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 ADALQ6DHV7 355 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 PRSS33Q8NF86 280 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 FGFBP2Q9BYJ0 223 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 IGSF9Q9P2J2 1179 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 AGO2Q9UKV8 859 aaKnown RBP18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 PCDHB8Q9UN66 801 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 PATJQ8NI35 1801 aa18.69■□□□□ 0.58
CDC42BPB-208ENST00000561271 H7C4K7 107 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 XPOTO43592 962 aaKnown RBP18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 PPP6R2O75170 966 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 GCNT3O95395 438 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 F13A1P00488 732 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 ADRB2P07550 413 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZSCAN22P10073 491 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 LAMP2P13473 410 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 PKP1Q13835 747 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 MRPL58Q14197 206 aaKnown RBP18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 TMEM132DQ14C87 1099 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 ZNF461Q8TAF7 563 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 STRA6Q9BX79 667 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 KCNH6Q9H252 994 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 TIMM13Q9Y5L4 95 aaPredicted RBP18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 STYXL1Q9Y6J8 313 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 GREB1Q4ZG55 1949 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 COL4A2P08572 1712 aa18.68■□□□□ 0.58
CDC42BPB-208ENST00000561271 FRMD3A2A2Y4 597 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 M0QZQ0 153 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 PRRG1O14668 218 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 ABLIM3O94929 683 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 YEATS4O95619 227 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 POU2F2P09086 479 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 AARSP49588 968 aaKnown RBP eCLIP18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 HTR4Q13639 388 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 UVSSAQ2YD98 709 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 L1TD1Q5T7N2 865 aaKnown RBP18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 SPATA1Q5VX52 437 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 SLFN12LQ6IEE8 588 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 APPL2Q8NEU8 664 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 BEST2Q8NFU1 509 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 ITFG1Q8TB96 612 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 POMGNT1Q8WZA1 660 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 OLFML3Q9NRN5 406 aa18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 DNMT3BQ9UBC3 853 aaKnown RBP18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.67■□□□□ 0.58
CDC42BPB-208ENST00000561271 FANCMQ8IYD8 2048 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 SEC24AO95486 1093 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 CPB1P15086 417 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 AVPR2P30518 371 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 ADSSP30520 456 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 NHLH1Q02575 133 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 E2F4Q16254 413 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 PABPC1LQ4VXU2 614 aaKnown RBP18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 SHC4Q6S5L8 630 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 CD302Q8IX05 232 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 ING5Q8WYH8 240 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 DHX58Q96C10 678 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 ACCSQ96QU6 501 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 MFSD1Q9H3U5 465 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 CYP4F11Q9HBI6 524 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 PANK4Q9NVE7 773 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 FBXL21Q9UKT6 434 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 CDH7Q9ULB5 785 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 INSL5Q9Y5Q6 135 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 NUMBLQ9Y6R0 609 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 MYH10P35580 1976 aa18.66■□□□□ 0.58
CDC42BPB-208ENST00000561271 ANAPC1Q9H1A4 1944 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms