RNA–Protein interactions for RNA: ENST00000561152.1

TCF12-222, Transcript of transcription factor 12, human

TSL 5

Gene TCF12, Length 675 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-222	ENST00000561152	PDE11A	Q9HCR9	933 aa		27.89	■■■□□ 2.06
TCF12-222	ENST00000561152	MAPK8IP1	Q9UQF2	711 aa		27.89	■■■□□ 2.06
TCF12-222	ENST00000561152	TRAF3IP3	Q9Y228	551 aa		27.89	■■■□□ 2.06
TCF12-222	ENST00000561152		H3BQ06	376 aa	Predicted RBP	27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	TEX28	O15482	410 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	GUCY2F	P51841	1108 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	PSMD5	Q16401	504 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	TJAP1	Q5JTD0	557 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	C9orf57	Q5W0N0	161 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	ELMSAN1	Q6PJG2	1045 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	ANKS3	Q6ZW76	656 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	ANKRD36BP1	Q96IX9	119 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	BRWD1	Q9NSI6	2320 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	DPP7	Q9UHL4	492 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	CD207	Q9UJ71	328 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	BARX2	Q9UMQ3	279 aa	Predicted RBP	27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	FAM50B	Q9Y247	325 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	VWA8	A3KMH1	1905 aa		27.88	■■■□□ 2.05
TCF12-222	ENST00000561152	ANO9	A1A5B4	782 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	GOLGA6L22	H0YM25	854 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152		I3L4J1	428 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	C1R	P00736	705 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	NR3C1	P04150	777 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	TMEM191B	P0C7N4	346 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	IGFBP6	P24592	240 aa	Predicted RBP	27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	TKT	P29401	623 aa	Known RBP	27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	DLX2	Q07687	328 aa	Predicted RBP	27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	COBLL1	Q53SF7	1204 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	APPL2	Q8NEU8	664 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	VN1R2	Q8NFZ6	395 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	LNX1	Q8TBB1	728 aa	Predicted RBP	27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	ERCC4	Q92889	916 aa	Predicted RBP	27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	FNBP1	Q96RU3	617 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	DZANK1	Q9NVP4	752 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	DMAC2	Q9NW81	257 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	CLEC1B	Q9P126	229 aa		27.87	■■■□□ 2.05
TCF12-222	ENST00000561152	ARHGEF37	A1IGU5	675 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	PIR	O00625	290 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	HOXB8	P17481	243 aa	Predicted RBP	27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	CLCN4	P51793	760 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	WNT7B	P56706	349 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	CYP24A1	Q07973	514 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	STIM1	Q13586	685 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	PSMD6	Q15008	389 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	NFIL3	Q16649	462 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	DSTYK	Q6XUX3	929 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	WDR49	Q8IV35	697 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	SLC22A17	Q8WUG5	538 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	MSLNL	Q96KJ4	702 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	ZNF560	Q96MR9	790 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	ITGA11	Q9UKX5	1188 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	PCDHB8	Q9UN66	801 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	FRMD4B	Q9Y2L6	1034 aa		27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	R3HCC1	Q9Y3T6	440 aa	Known RBP	27.86	■■■□□ 2.05
TCF12-222	ENST00000561152	GLUD1	P00367	558 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	TNNC2	P02585	160 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	RPL13	P26373	211 aa	Known RBP	27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	PPP1R2	P41236	205 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	PNPLA4	P41247	253 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	AARS	P49588	968 aa	Known RBP eCLIP	27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	DUOXA2	Q1HG44	320 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	ANKRD54	Q6NXT1	300 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	SMYD4	Q8IYR2	804 aa	Predicted RBP	27.85	■■■□□ 2.05
TCF12-222	ENST00000561152	INTS13	Q9NVM9	706 aa		27.85	■■■□□ 2.05
TCF12-222	ENST00000561152		H7C4K7	107 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152		M0QZQ0	153 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	TAF6	P49848	677 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	LILRA4	P59901	499 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	RBM10	P98175	930 aa	Known RBP	27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	PTCRA	Q6ISU1	281 aa	Predicted RBP	27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	MFSD14A	Q96MC6	490 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	MTRR	Q9UBK8	725 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	BACE2	Q9Y5Z0	518 aa		27.84	■■■□□ 2.05
TCF12-222	ENST00000561152	XIRP2	A4UGR9	3374 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	UNC80	Q8N2C7	3258 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	SPDYE4	A6NLX3	237 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	DLAT	P10515	647 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	EPCAM	P16422	314 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	RPL17	P18621	184 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	TNNI1	P19237	187 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	PRCP	P42785	496 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	KCNQ1	P51787	676 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	SMAD4	Q13485	552 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	SV2C	Q496J9	727 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	VARS2	Q5ST30	1063 aa	Known RBP	27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	TMEM130	Q8N3G9	435 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	C1orf127	Q8N9H9	656 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	CGRRF1	Q99675	332 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	MTMR12	Q9C0I1	747 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	MAN1B1	Q9UKM7	699 aa		27.83	■■■□□ 2.05
TCF12-222	ENST00000561152	PPEF2	O14830	753 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	ITGB3	P05106	788 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	ODC1	P11926	461 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	NR2F2	P24468	414 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	CLUL1	Q15846	466 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	EDRF1	Q3B7T1	1238 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	CEP135	Q66GS9	1140 aa		27.82	■■■□□ 2.04
TCF12-222	ENST00000561152	USP37	Q86T82	979 aa		27.82	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms