RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 RASA3Q14644 834 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 RPGRQ92834 1020 aaKnown RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 RBM41Q96IZ5 413 aaKnown RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 FIZ1Q96SL8 496 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 GTF3C4Q9UKN8 822 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 PRPF4O43172 522 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■□□□ 14.1
TPM1-228ENST00000560975 ADRA1DP25100 572 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 ZRSR2Q15696 482 aaKnown RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 GPATCH4Q5T3I0 446 aaKnown RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 RINLQ6ZS11 566 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 SYDE1Q6ZW31 735 aaPredicted RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 CFAP57Q96MR6 1250 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 MAK16Q9BXY0 300 aaKnown RBP17.48■□□□□ 0.39
TPM1-228ENST00000560975 OCEL1Q9H607 264 aa17.48■□□□□ 0.39
TPM1-228ENST00000560975 C2orf71A6NGG8 1288 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 GOLGA8RI6L899 631 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 ZBED4O75132 1171 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 GZMAP12544 262 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 CPA2P48052 419 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 SEPT7Q16181 437 aaKnown RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 TBC1D10BQ4KMP7 808 aaPredicted RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 LRRC23Q53EV4 343 aaPredicted RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 PDCD7Q8N8D1 485 aaKnown RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 GATA6Q92908 595 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 KREMEN1Q96MU8 473 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 KLF6Q99612 283 aaPredicted RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 SAR1AQ9NR31 198 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 KCNQ5Q9NR82 932 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 C10orf71Q711Q0 1435 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 ZSCAN5DPP0CG00 497 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 TROVE2P10155 538 aaKnown RBP eCLIP17.47■□□□□ 0.39
TPM1-228ENST00000560975 KRT4P19013 534 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 RFX1P22670 979 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 VAMP7P51809 220 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 USP4Q13107 963 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 GLIS1Q8NBF1 620 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 ITFG2Q969R8 447 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 SETDB2Q96T68 719 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 CYLDQ9NQC7 956 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 KRT82Q9NSB4 513 aa17.47■□□□□ 0.39
TPM1-228ENST00000560975 RPL26L1Q9UNX3 145 aaKnown RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 SMG5Q9UPR3 1016 aaKnown RBP17.47■□□□□ 0.39
TPM1-228ENST00000560975 ETS2P15036 469 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 MAN1A1P33908 653 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 AP1B1Q10567 949 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 MFSD14BQ5SR56 506 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 RGS9BPQ6ZS82 235 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 RIBC1Q8N443 379 aaPredicted RBP17.46■□□□□ 0.39
TPM1-228ENST00000560975 CCDC89Q8N998 374 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 BICD1Q96G01 975 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 TIPINQ9BVW5 301 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 SYNCQ9H7C4 482 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 UVRAGQ9P2Y5 699 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 IGKV6D-41A0A0C4DH26 115 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 BANF1O75531 89 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 AMPD1P23109 780 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 Q4G0T1 1027 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 NSL1Q96IY1 281 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 ANKFY1Q9P2R3 1169 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 NEU2Q9Y3R4 380 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 NHSQ6T4R5 1651 aa17.46■□□□□ 0.39
TPM1-228ENST00000560975 SLITRK3O94933 977 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 ETS1P14921 441 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 SERPINB3P29508 390 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 NR1H3Q13133 447 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 NFIL3Q16649 462 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 SHROOM1Q2M3G4 852 aaPredicted RBP17.46■□□□□ 0.38
TPM1-228ENST00000560975 WDR72Q3MJ13 1102 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 DHX38Q92620 1227 aaKnown RBP17.46■□□□□ 0.38
TPM1-228ENST00000560975 FAM20AQ96MK3 541 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 ZNF184Q99676 751 aaPredicted RBP17.46■□□□□ 0.38
TPM1-228ENST00000560975 CBWD1Q9BRT8 395 aa17.46■□□□□ 0.38
TPM1-228ENST00000560975 POLR3CQ9BUI4 534 aaPredicted RBP17.46■□□□□ 0.38
TPM1-228ENST00000560975 GOLGA8IPA6NC78 632 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 GOLGA8JA6NMD2 632 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 CYP1A1P04798 512 aaPredicted RBP17.45■□□□□ 0.38
TPM1-228ENST00000560975 CYP11B1P15538 503 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 TM4SF1P30408 202 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 NOP14P78316 857 aaKnown RBP17.45■□□□□ 0.38
TPM1-228ENST00000560975 MCL1Q07820 350 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 DYNC1I2Q13409 638 aaKnown RBP17.45■□□□□ 0.38
TPM1-228ENST00000560975 FAM71AQ8IYT1 594 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 FAM81AQ8TBF8 368 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 PTCD3Q96EY7 689 aaKnown RBP17.45■□□□□ 0.38
TPM1-228ENST00000560975 FHDC1Q9C0D6 1143 aaPredicted RBP17.45■□□□□ 0.38
TPM1-228ENST00000560975 KLHL11Q9NVR0 708 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 TBX3O15119 743 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 ZWINTO95229 277 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 LYNP07948 512 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 RXRBP28702 533 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 PPP2R5CQ13362 524 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 CNPY1Q3B7I2 92 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 STXBP4Q6ZWJ1 553 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 TTC7BQ86TV6 843 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 LRRC6Q86X45 466 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 ANKMY2Q8IV38 441 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 ZBED8Q8IZ13 594 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 PLEKHO2Q8TD55 490 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
TPM1-228ENST00000560975 TMEM117Q9H0C3 514 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms