RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 EIF2S2P20042 333 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PDE6CP51160 858 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 SEC24CP53992 1094 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 DEUP1Q05D60 604 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 C19orf57Q0VDD7 668 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 DYNC1I2Q13409 638 aaKnown RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 NNTQ13423 1086 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 NAA16Q6N069 864 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ZBTB8BQ8NAP8 495 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 SIMC1Q8NDZ2 872 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC30A5Q8TAD4 765 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 DPF3Q92784 378 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 RUFY1Q96T51 708 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 NUP88Q99567 741 aaPredicted RBP7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 OSBPL1AQ9BXW6 950 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM7Q9C029 511 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KCTD10Q9H3F6 313 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 KRT84Q9NSB2 600 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 WDR35Q9P2L0 1181 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 FBXL5Q9UKA1 691 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 ASB3Q9Y575 518 aa7.22□□□□□ -1.25
TSPAN3-209ENST00000560715 SH3TC1Q8TE82 1336 aa7.21□□□□□ -1.25
TSPAN3-209ENST00000560715 AKR1B15C9JRZ8 316 aaPredicted RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 CYP27B1O15528 508 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 HSF2BPO75031 334 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 PSMA3P25788 255 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 MDH1P40925 334 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ATXN1P54253 815 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ATP11AP98196 1134 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 TOB2Q14106 344 aaPredicted RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 MBTPS1Q14703 1052 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 MAP3K21Q5TCX8 1036 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 DARS2Q6PI48 645 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 HFE2Q6ZVN8 426 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 Q8NFD4 153 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 TEKT4Q8WW24 435 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 RUBCNQ92622 972 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ZCWPW1Q9H0M4 648 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 GJD2Q9UKL4 321 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 PHF24Q9UPV7 400 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 UBN2Q6ZU65 1347 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 PTPDC1A2A3K4 754 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 DPPA5A6NC42 116 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 E7EVH7 732 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 DIAPH2O60879 1101 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 POTEIP0CG38 1075 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ALDH3A1P30838 453 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 CASP5P51878 434 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 CKAP4Q07065 602 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 CREB3L3Q68CJ9 461 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 DENND5AQ6IQ26 1287 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 C16orf87Q6PH81 154 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 TXNDC11Q6PKC3 985 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 GALNTL5Q7Z4T8 443 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 LRRTM4Q86VH4 590 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ZC3H7AQ8IWR0 971 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 DDX54Q8TDD1 881 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 FERMT2Q96AC1 680 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ANKRD27Q96NW4 1050 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 MMS19Q96T76 1030 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 FAM167BQ9BTA0 163 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 MXD3Q9BW11 206 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 ZWILCHQ9H900 591 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 CYP26B1Q9NR63 512 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 TUBE1Q9UJT0 475 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 PCDHA4Q9UN74 947 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 PA2G4Q9UQ80 394 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 L3MBTL1Q9Y468 752 aa7.21□□□□□ -1.26
TSPAN3-209ENST00000560715 SPATA31A3Q5VYP0 1347 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 A0A0G2JS52 829 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 LRRD1A4D1F6 860 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 LGALS16A8MUM7 142 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 BHMG1C9JSJ3 638 aaPredicted RBP7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 PPIP5K2O43314 1243 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 B3GALT2O43825 422 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 ALADP13716 330 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 SLC9A1P19634 815 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 RPS6KB1P23443 525 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 IL4RP24394 825 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 HSPA1LP34931 641 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 GNAQP50148 359 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 CCNG1P51959 295 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 MRPS35P82673 323 aaKnown RBP7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 ATP8B2P98198 1209 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 MMEL1Q495T6 779 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 BLOC1S2Q6QNY1 142 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 RTN4RL1Q86UN2 441 aaPredicted RBP7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 SH2D3CQ8N5H7 860 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 SSH3Q8TE77 659 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 C17orf50Q8WW18 174 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 ZUFSPQ96AP4 578 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 MOV10L1Q9BXT6 1211 aaKnown RBP7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 ZNF510Q9Y2H8 683 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 C2CD2Q9Y426 696 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 PKD1L3Q7Z443 1732 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 CPDO75976 1380 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 HEG1Q9ULI3 1381 aa7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 VIMP08670 466 aaKnown RBP7.2□□□□□ -1.26
TSPAN3-209ENST00000560715 HARSP12081 509 aaKnown RBP7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms