RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 WDR49Q8IV35 697 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 C1orf127Q8N9H9 656 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 CGRRF1Q99675 332 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 NGRNQ9NPE2 291 aaKnown RBP16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 CHST7Q9NS84 486 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 INTS13Q9NVM9 706 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 TMEM63CQ9P1W3 806 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 C2orf71A6NGG8 1288 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PIRO00625 290 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PER2O15055 1255 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 CETN3O15182 167 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 ITGB3P05106 788 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 TNNI1P19237 187 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 TKTP29401 623 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PSMC2P35998 433 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 NRIP1P48552 1158 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 DLG4P78352 724 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 DSG1Q02413 1049 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 HYAL1Q12794 435 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 USP41Q3LFD5 358 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PDE12Q6L8Q7 609 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 KIAA1841Q6NSI8 718 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 TTI2Q6NXR4 508 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 CEP57Q86XR8 500 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 ZC3H3Q8IXZ2 948 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 FAM186BQ8IYM0 893 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 MRPL43Q8N983 215 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PARD3BQ8TEW8 1205 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 CACTINQ8WUQ7 758 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 ZNF516Q92618 1163 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 ANKRD36BP1Q96IX9 119 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 DUSP9Q99956 384 aaKnown RBP16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 IGFLR1Q9H665 355 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 STK39Q9UEW8 545 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 PLXNA3P51805 1871 aa16.76■□□□□ 0.27
LYSMD2-204ENST00000560491 SPTLC1O15269 473 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 LILRB3O75022 631 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 TNNC2P02585 160 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 KRT19P08727 400 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 NLRP12P59046 1061 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 FKBP3Q00688 224 aaKnown RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 ELAVL2Q12926 359 aaKnown RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 KIAA0319Q5VV43 1072 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 PRSS55Q6UWB4 352 aaPredicted RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 CSGALNACT2Q8N6G5 542 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 CXorf38Q8TB03 319 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 RIN2Q8WYP3 895 aaPredicted RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 TTPALQ9BTX7 342 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 TLE6Q9H808 572 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 MRPL17Q9NRX2 175 aaKnown RBP16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 SIX4Q9UIU6 781 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 ITGA11Q9UKX5 1188 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 AGAP1Q9UPQ3 857 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 PRUNE2Q8WUY3 3088 aa16.75■□□□□ 0.27
LYSMD2-204ENST00000560491 BICDL2A1A5D9 508 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 MAPK13O15264 365 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 TRAPPC3O43617 180 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 TRIM49P0CI25 452 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 TRIM49CP0CI26 452 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 EPB41P11171 864 aaKnown RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 FGFR3P22607 806 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 AARSP49588 968 aaKnown RBP eCLIP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 VAMP7P51809 220 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 LILRA4P59901 499 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 RBM10P98175 930 aaKnown RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 BMS1Q14692 1282 aaKnown RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 SKIV2LQ15477 1246 aaKnown RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 DUOXA2Q1HG44 320 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 C1orf220Q5T0J3 134 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 INTS8Q75QN2 995 aaKnown RBP16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 TRAPPC11Q7Z392 1133 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 MLKLQ8NB16 471 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 SUSD3Q96L08 255 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 MED15Q96RN5 788 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 IRAK3Q9Y616 596 aa16.74■□□□□ 0.27
LYSMD2-204ENST00000560491 SPTBN5Q9NRC6 3674 aaKnown RBP16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 LINC01565O15544 149 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 CNPP09543 421 aaKnown RBP16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 KRT13P13646 458 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 RPL17P18621 184 aaKnown RBP16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 TAF6P49848 677 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 CLDN10P78369 228 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 BFSP1Q12934 665 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 PSMD5Q16401 504 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 DUSP6Q16828 381 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 DSTYKQ6XUX3 929 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 LNX1Q8TBB1 728 aaPredicted RBP16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 TMC2Q8TDI7 906 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 PIK3R5Q8WYR1 880 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 PPP2R3CQ969Q6 453 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 BORCS6Q96GS4 357 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 ZNF560Q96MR9 790 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 MKNK1Q9BUB5 465 aa16.73■□□□□ 0.27
LYSMD2-204ENST00000560491 PRDM6Q9NQX0 595 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms