RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 POSTNQ15063 836 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 PDE12Q6L8Q7 609 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 UNC13DQ70J99 1090 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 HS2ST1Q7LGA3 356 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 ADGRD2Q7Z7M1 963 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 DDX53Q86TM3 631 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 MAP4K3Q8IVH8 894 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 SAAL1Q96ER3 474 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 PAGE5Q96GU1 130 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 C7orf25Q9BPX7 421 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 FAM213AQ9BRX8 229 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 APOL5Q9BWW9 433 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 UBE2ZQ9H832 354 aaPredicted RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 GOLGA2P5Q9HBQ8 144 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 STK39Q9UEW8 545 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 ADAM28Q9UKQ2 775 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 LZTS1Q9Y250 596 aa8.7□□□□□ -1.02
LRRC28-219ENST00000560483 TCF20Q9UGU0 1960 aaKnown RBP8.7□□□□□ -1.02
LRRC28-219ENST00000560483 SMIM28A0A1B0GU29 152 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 A0A1W2PQ27 194 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 A0A1W2PQ64 194 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 A0A1W2PQD8 194 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 GOLGA8IPA6NC78 632 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 GOLGA8JA6NMD2 632 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 HIDE1A8MVS5 230 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 TISP43B9A030 160 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 ANKRD63C9JTQ0 380 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 PODXLO00592 558 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 PTGESO14684 152 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 TRAPPC3O43617 180 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 B4GALT3O60512 393 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 KINO60870 393 aaKnown RBP8.69□□□□□ -1.02
LRRC28-219ENST00000560483 POU3F3P20264 500 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-219ENST00000560483 MCM4P33991 863 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 GLUD2P49448 558 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 CLCNKBP51801 687 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 CASP5P51878 434 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 KCNA1Q09470 495 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 HYAL1Q12794 435 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 FAM171A1Q5VUB5 890 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 KANK3Q6NY19 840 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 FUT10Q6P4F1 479 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 CNNM4Q6P4Q7 775 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 KRBA2Q6ZNG9 492 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 RIN2Q8WYP3 895 aaPredicted RBP8.69□□□□□ -1.02
LRRC28-219ENST00000560483 B3GALT6Q96L58 329 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 SNX27Q96L92 541 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 PAAF1Q9BRP4 392 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 CXCL16Q9H2A7 254 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 GOLPH3LQ9H4A5 285 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 PTPRHQ9HD43 1115 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 OLFML3Q9NRN5 406 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 SSX2IPQ9Y2D8 614 aa8.69□□□□□ -1.02
LRRC28-219ENST00000560483 SF3B1O75533 1304 aaKnown RBP eCLIP8.69□□□□□ -1.02
LRRC28-219ENST00000560483 REV3LO60673 3130 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 UNC80Q8N2C7 3258 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 PVALEFA0A1B0GWK0 134 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 FSD2A1L4K1 749 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 LACTBL1A8MY62 500 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 F8W810 466 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 CLIC2O15247 247 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 LINC01565O15544 149 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 KIF20AO95235 890 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 KIF4AO95239 1232 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 SMC2O95347 1197 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 LDHAP00338 332 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 SOD2P04179 222 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 RPN1P04843 607 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 PROZP22891 400 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 CYP2J2P51589 502 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 KCNQ1P51787 676 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 TFAMQ00059 246 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ELAVL2Q12926 359 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 CAMK1Q14012 370 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 TMEM132DQ14C87 1099 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 PTPRNQ16849 979 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 USP41Q3LFD5 358 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ZBTB41Q5SVQ8 909 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 DSTYKQ6XUX3 929 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 GSTCDQ8NEC7 633 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 BEST2Q8NFU1 509 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 BCL7CQ8WUZ0 217 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ATXN2LQ8WWM7 1075 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 C18orf25Q96B23 403 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 PABPC5Q96DU9 382 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 UROC1Q96N76 676 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 FGFBP2Q9BYJ0 223 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ZBP1Q9H171 429 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 IKZF4Q9H2S9 585 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ST6GALNAC4Q9H4F1 302 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 EVA1BQ9NVM1 165 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 MARCH5Q9NX47 278 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 RBAKQ9NYW8 714 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 BARX2Q9UMQ3 279 aaPredicted RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 UBQLN1Q9UMX0 589 aaKnown RBP8.68□□□□□ -1.02
LRRC28-219ENST00000560483 FAM50BQ9Y247 325 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ZMYM2Q9UBW7 1377 aa8.68□□□□□ -1.02
LRRC28-219ENST00000560483 ATG2AQ2TAZ0 1938 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms