RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 KCNC3Q14003 757 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
RPL28-209ENST00000560055 RBM23Q86U06 439 aaKnown RBP18.21■□□□□ 0.51
RPL28-209ENST00000560055 EFHBQ8N7U6 833 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
RPL28-209ENST00000560055 FAM84AQ96KN4 292 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 SUSD3Q96L08 255 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 TTPALQ9BTX7 342 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 RXFP1Q9HBX9 757 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
RPL28-209ENST00000560055 INTS13Q9NVM9 706 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 SSX2IPQ9Y2D8 614 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 VWA8A3KMH1 1905 aa18.21■□□□□ 0.51
RPL28-209ENST00000560055 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 PPP1R3GB7ZBB8 358 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 I3L4J1 428 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 BIN1O00499 593 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 MAPK13O15264 365 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 TRAPPC3O43617 180 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 CLASP2O75122 1294 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 GLP2RO95838 553 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 CNPP09543 421 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 PPP1R2P41236 205 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 PMS1P54277 932 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 LILRA4P59901 499 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 TFAMQ00059 246 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 WDR49Q8IV35 697 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 ZC3H3Q8IXZ2 948 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 C1orf127Q8N9H9 656 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 VN1R2Q8NFZ6 395 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 OR5B17Q8NGF7 314 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 PLEKHO2Q8TD55 490 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 CACTINQ8WUQ7 758 aaKnown RBP18.2■□□□□ 0.5
RPL28-209ENST00000560055 PIK3R5Q8WYR1 880 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 MTMR12Q9C0I1 747 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 NUP62CLQ9H1M0 184 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 NUB1Q9Y5A7 615 aa18.2■□□□□ 0.5
RPL28-209ENST00000560055 C5orf42Q9H799 3197 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 FSD2A1L4K1 749 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 M0QZQ0 153 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 C2CD2LO14523 706 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 SYN3O14994 580 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 SPTLC1O15269 473 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 AKAP3O75969 853 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 RPL13P26373 211 aaKnown RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 TKTP29401 623 aaKnown RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 LTBRP36941 435 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 KCNQ1P51787 676 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 CLDN10P78369 228 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 LRRC63Q05C16 580 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 ADAM15Q13444 863 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 LMBRD2Q68DH5 695 aaPredicted RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 KIAA1841Q6NSI8 718 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 FOXR2Q6PJQ5 311 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 LNX1Q8TBB1 728 aaPredicted RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 RIN2Q8WYP3 895 aaPredicted RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 DHTKD1Q96HY7 919 aaPredicted RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 KLHL5Q96PQ7 755 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 CGRRF1Q99675 332 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 UBE2ZQ9H832 354 aaPredicted RBP18.19■□□□□ 0.5
RPL28-209ENST00000560055 SIX4Q9UIU6 781 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 ITGA11Q9UKX5 1188 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 COG5Q9UP83 839 aa18.19■□□□□ 0.5
RPL28-209ENST00000560055 SCN1AP35498 2009 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 TRIM49BA6NDI0 452 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 PSMA7O14818 248 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 TEX28O15482 410 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 LINC01565O15544 149 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 TBX10O75333 385 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 MBD3O95983 291 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 DLATP10515 647 aaKnown RBP18.18■□□□□ 0.5
RPL28-209ENST00000560055 PAX3P23760 479 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 CCNE1P24864 410 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 MCM4P33991 863 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 MCCD1P59942 119 aaPredicted RBP18.18■□□□□ 0.5
RPL28-209ENST00000560055 ADAM9Q13443 819 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 STIM1Q13586 685 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 DUOXA2Q1HG44 320 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 CEP135Q66GS9 1140 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 ANKRD40Q6AI12 368 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 SCARA3Q6AZY7 606 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 TMEM184AQ6ZMB5 413 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 ADAMTS19Q8TE59 1207 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 PARD3BQ8TEW8 1205 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 HLA-CQ95604 372 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 CCDC127Q96BQ5 260 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 ANKRD36BP1Q96IX9 119 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 NECAB3Q96P71 396 aaPredicted RBP18.18■□□□□ 0.5
RPL28-209ENST00000560055 FNBP1Q96RU3 617 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 POP1Q99575 1024 aaKnown RBP18.18■□□□□ 0.5
RPL28-209ENST00000560055 EMILIN2Q9BXX0 1053 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 IGFLR1Q9H665 355 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.18■□□□□ 0.5
RPL28-209ENST00000560055 FNIP2Q9P278 1114 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 FRMD4BQ9Y2L6 1034 aa18.18■□□□□ 0.5
RPL28-209ENST00000560055 LRRIQ3A6PVS8 624 aaPredicted RBP18.17■□□□□ 0.5
RPL28-209ENST00000560055 ITGB3P05106 788 aa18.17■□□□□ 0.5
RPL28-209ENST00000560055 TMEM191BP0C7N4 346 aa18.17■□□□□ 0.5
RPL28-209ENST00000560055 POLR2BP30876 1174 aaKnown RBP18.17■□□□□ 0.5
RPL28-209ENST00000560055 CA8P35219 290 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms