RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 CASD1Q96PB1 797 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 FAM193BQ96PV7 902 aaPredicted RBP11.23□□□□□ -0.61
TPM1-221ENST00000559831 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.23□□□□□ -0.611e-6■□□□□ 10.6
TPM1-221ENST00000559831 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 GANQ9H2C0 597 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 NLRC4Q9NPP4 1024 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 PLCB1Q9NQ66 1216 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 APEX2Q9UBZ4 518 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 NR2E3Q9Y5X4 410 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 FHOD1Q9Y613 1164 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 KIAA1671Q9BY89 1806 aa11.23□□□□□ -0.61
TPM1-221ENST00000559831 INPPL1O15357 1258 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 ZC3H11AO75152 810 aaKnown RBP eCLIP11.22□□□□□ -0.61
TPM1-221ENST00000559831 NOL4O94818 638 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 GYPCP04921 128 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 CASP14P31944 242 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 TBX2Q13207 712 aaPredicted RBP11.22□□□□□ -0.61
TPM1-221ENST00000559831 TUSC3Q13454 348 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 RAPGEF1Q13905 1077 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 ARHGAP44Q17R89 818 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 SGSM1Q2NKQ1 1148 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 TMEM240Q5SV17 173 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 IQCEQ6IPM2 695 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 DPY19L2P1Q6NXN4 242 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 SCARA5Q6ZMJ2 495 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 RRAGAQ7L523 313 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 PPM1KQ8N3J5 372 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 RABGGTAQ92696 567 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 HPDLQ96IR7 371 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 PDLIM2Q96JY6 352 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 ZNF560Q96MR9 790 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 APOBEC3GQ9HC16 384 aaKnown RBP11.22□□□□□ -0.61
TPM1-221ENST00000559831 UBE2TQ9NPD8 197 aaPredicted RBP11.22□□□□□ -0.61
TPM1-221ENST00000559831 TBC1D13Q9NVG8 400 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 CEP72Q9P209 647 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 KANSL3Q9P2N6 904 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 IMPACTQ9P2X3 320 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 NXF1Q9UBU9 619 aaKnown RBP11.22□□□□□ -0.61
TPM1-221ENST00000559831 DNAJC12Q9UKB3 198 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 AJAP1Q9UKB5 411 aaPredicted RBP11.22□□□□□ -0.61
TPM1-221ENST00000559831 NUB1Q9Y5A7 615 aa11.22□□□□□ -0.61
TPM1-221ENST00000559831 AKR1B15C9JRZ8 316 aaPredicted RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 RNF225M0QZC1 329 aaPredicted RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 PODXLO00592 558 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 ASS1P00966 412 aaKnown RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 UCHL3P15374 230 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 LRPAP1P30533 357 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 ATICP31939 592 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 FXR1P51114 621 aaKnown RBP eCLIP11.21□□□□□ -0.61
TPM1-221ENST00000559831 ADKP55263 362 aaKnown RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 MYO1EQ12965 1108 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 NAB2Q15742 525 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 FIGNQ5HY92 759 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 ZNF667Q5HYK9 610 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 PHLDB3Q6NSJ2 640 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 CCDC186Q7Z3E2 898 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 GPIHBP1Q8IV16 184 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 ZNF397Q8NF99 534 aaPredicted RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 TAF4BQ92750 862 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 KAT5Q92993 513 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 TOP1MTQ969P6 601 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 IQCDQ96DY2 449 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 SPAG5Q96R06 1193 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 PPP1R9BQ96SB3 815 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 MRPL9Q9BYD2 267 aaKnown RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 TTYH3Q9C0H2 523 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 XYLT2Q9H1B5 865 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 CAPN11Q9UMQ6 739 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 POLIQ9UNA4 740 aa11.21□□□□□ -0.61
TPM1-221ENST00000559831 LUC7L2Q9Y383 392 aaKnown RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.21□□□□□ -0.61
TPM1-221ENST00000559831 GBF1Q92538 1859 aa11.21□□□□□ -0.62
TPM1-221ENST00000559831 A0A1W2PQJ5 194 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 ANO9A1A5B4 782 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 PIRO00625 290 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 B4GALT3O60512 393 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 MFAP3LO75121 409 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 DGKIO75912 1065 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 DDHD2O94830 711 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 P4HA1P13674 534 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 RFX1P22670 979 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 RPL9P32969 192 aaKnown RBP11.2□□□□□ -0.62
TPM1-221ENST00000559831 KRT9P35527 623 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 MAGEA10P43363 369 aaPredicted RBP11.2□□□□□ -0.62
TPM1-221ENST00000559831 RAP1GAPP47736 663 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 OR1G1P47890 313 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 TAF6P49848 677 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 CLCNKBP51801 687 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 MFAP3P55082 362 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 TNNC1P63316 161 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 CUL2Q13617 745 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 WDR72Q3MJ13 1102 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 SV2CQ496J9 727 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 PDXDC1Q6P996 788 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 ZNF280BQ86YH2 543 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 CNGA4Q8IV77 575 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
TPM1-221ENST00000559831 LRRC43Q8N309 656 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms