RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 RUFY4Q6ZNE9 571 aa12.04□□□□□ -0.48
CLPX-204ENST00000559152 MON1BQ7L1V2 547 aa12.04□□□□□ -0.48
CLPX-204ENST00000559152 LRRC71Q8N4P6 559 aa12.04□□□□□ -0.48
CLPX-204ENST00000559152 CPA5Q8WXQ8 436 aa12.04□□□□□ -0.48
CLPX-204ENST00000559152 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
CLPX-204ENST00000559152 HMGB1P1B2RPK0 211 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 THAP12O43422 761 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 LSM8O95777 96 aaKnown RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 CETPP11597 493 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 RRM1P23921 792 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 KYAT1Q16773 422 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ARMCX2Q7L311 632 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZNF467Q7Z7K2 595 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 TRIM50Q86XT4 487 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 JAMLQ86YT9 394 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 C12orf50Q8NA57 414 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 CYFIP2Q96F07 1278 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ANKRD36BP1Q96IX9 119 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 FMO2Q99518 471 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 CELF4Q9BZC1 486 aaKnown RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZNF518BQ9C0D4 1074 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 NIF3L1Q9GZT8 377 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PARVAQ9NVD7 372 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 CHORDC1Q9UHD1 332 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 TNFSF13BQ9Y275 285 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 NR2E1Q9Y466 385 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 FAM170AA1A519 330 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 INO80B-WBP1J3KQ70 363 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 B4GALT4O60513 344 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PROSCO94903 275 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 GH1P01241 217 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 TMEM191BP0C7N4 346 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 HSD17B3P37058 310 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PHKA2P46019 1235 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 GCLCP48506 637 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 MARCKSL1P49006 195 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZNF132P52740 706 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 NOMO3P69849 1222 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 TNFAIP2Q03169 654 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZSCAN26Q16670 478 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZNF568Q3ZCX4 644 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 CCDC137Q6PK04 289 aaKnown RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 DDX42Q86XP3 938 aaKnown RBP eCLIP12.03□□□□□ -0.48
CLPX-204ENST00000559152 PRELID2Q8N945 189 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PIK3R5Q8WYR1 880 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 EMID1Q96A84 441 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 ZBTB9Q96C00 473 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 BTBD6Q96KE9 485 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 INO80BQ9C086 356 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 R3HDMLQ9H3Y0 253 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 PTPRHQ9HD43 1115 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 ERVK-5Q9HDB9 667 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 HOMER3Q9NSC5 361 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 FEZ2Q9UHY8 353 aaPredicted RBP12.03□□□□□ -0.48
CLPX-204ENST00000559152 PLAAQ9Y263 795 aa12.03□□□□□ -0.48
CLPX-204ENST00000559152 COL1A2P08123 1366 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 GLTPD2A6NH11 291 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 ABLIM1O14639 778 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 FSCN2O14926 492 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 CALB1P05937 261 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 TMOD1P28289 359 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 TNFSF9P41273 254 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 FAM187BQ17R55 369 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 ZNF792Q3KQV3 632 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 UBR7Q8N806 425 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 ZNF606Q8WXB4 792 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 ELMO3Q96BJ8 720 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 FAM212AQ96EL1 285 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 NLRP4Q96MN2 994 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 MTMR12Q9C0I1 747 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 DPH5Q9H2P9 285 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 LRRC19Q9H756 370 aa12.02□□□□□ -0.48
CLPX-204ENST00000559152 MTRF1LQ9UGC7 380 aaKnown RBP12.02□□□□□ -0.48
CLPX-204ENST00000559152 ZHX1Q9UKY1 873 aaPredicted RBP12.02□□□□□ -0.48
CLPX-204ENST00000559152 MROH7Q68CQ1 1323 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 RBM47A0AV96 593 aaKnown RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 PSTPIP1O43586 416 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 SHOX2O60902 331 aaPredicted RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 CST3P01034 146 aaPredicted RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 KRT14P02533 472 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 MYZAPP0CAP1 466 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 COILP38432 576 aaPredicted RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 CETN2P41208 172 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 PTGIRP43119 386 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 GTF2A2P52657 109 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 EIF3BP55884 814 aaKnown RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 SKOR1P84550 965 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 TAP1Q03518 808 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 ARHGAP1Q07960 439 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 SEZ6Q53EL9 994 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 EAPPQ56P03 285 aaPredicted RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 EMC10Q5UCC4 262 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 PLEKHA7Q6IQ23 1121 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.49
CLPX-204ENST00000559152 TMC3Q7Z5M5 1100 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 RHOT1Q8IXI2 618 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
CLPX-204ENST00000559152 PPTC7Q8NI37 304 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms