RNA–Protein interactions for RNA: ENST00000559151.1

CASC4-208, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 883 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-208ENST00000559151 LMF1Q96S06 567 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 FBXO34Q9NWN3 711 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 COL20A1Q9P218 1284 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 SRRDQ9UH36 339 aa13.49□□□□□ -0.25
CASC4-208ENST00000559151 AFF4Q9UHB7 1163 aaKnown RBP13.49□□□□□ -0.25
CASC4-208ENST00000559151 PARP1P09874 1014 aaKnown RBP13.48□□□□□ -0.25
CASC4-208ENST00000559151 PLEKHH3Q7Z736 793 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 RNF152Q8N8N0 203 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 BORCS6Q96GS4 357 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 MSLNLQ96KJ4 702 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 CRB3Q9BUF7 120 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 LSM14BQ9BX40 385 aaKnown RBP13.48□□□□□ -0.25
CASC4-208ENST00000559151 DPH1Q9BZG8 443 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 ARFGAP3Q9NP61 516 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 JKAMPQ9P055 326 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 CFAP97Q9P2B7 532 aa13.48□□□□□ -0.25
CASC4-208ENST00000559151 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 ZNF783Q6ZMS7 281 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 ZNF365Q70YC5 407 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 TMEM176AQ96HP8 235 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 SMURF2Q9HAU4 748 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 CDC23Q9UJX2 597 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 PADI4Q9UM07 663 aa13.47□□□□□ -0.25
CASC4-208ENST00000559151 TBKBP1A7MCY6 615 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 BTN3A1O00481 513 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 HAUS5O94927 633 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 AMHP03971 560 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 PSMC1P62191 440 aaKnown RBP13.46□□□□□ -0.25
CASC4-208ENST00000559151 PPP2CBP62714 309 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 PPP2CAP67775 309 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 BMT2Q1RMZ1 405 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 KLHDC7AQ5VTJ3 777 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 HIBCHQ6NVY1 386 aaPredicted RBP13.46□□□□□ -0.25
CASC4-208ENST00000559151 LGI4Q8N135 537 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 NLGN4YQ8NFZ3 816 aaPredicted RBP13.46□□□□□ -0.25
CASC4-208ENST00000559151 SELENOOQ9BVL4 669 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 WDR12Q9GZL7 423 aaKnown RBP13.46□□□□□ -0.25
CASC4-208ENST00000559151 SEC61A2Q9H9S3 476 aa13.46□□□□□ -0.25
CASC4-208ENST00000559151 KLRG2A4D1S0 409 aaPredicted RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 ABHD16AO95870 558 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 RARBP10826 455 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 IL6STP40189 918 aaPredicted RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 RPS16P62249 146 aaKnown RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 KRT72Q14CN4 511 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 ZNF124Q15973 351 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 PKN1Q16512 942 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 FKBP15Q5T1M5 1219 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 NMD3Q96D46 503 aaKnown RBP13.45□□□□□ -0.26
CASC4-208ENST00000559151 PLA2G12BQ9BX93 195 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 GSTO2Q9H4Y5 243 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 RLIMQ9NVW2 624 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 PCDHGB2Q9Y5G2 931 aa13.45□□□□□ -0.26
CASC4-208ENST00000559151 POMCP01189 267 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 ALAS1P13196 640 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 PPM1AP35813 382 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 SLC13A2Q13183 592 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 HABP2Q14520 560 aaPredicted RBP13.44□□□□□ -0.26
CASC4-208ENST00000559151 MYLK4Q86YV6 388 aaPredicted RBP13.44□□□□□ -0.26
CASC4-208ENST00000559151 RNF169Q8NCN4 708 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 MEGF9Q9H1U4 602 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 NELFAQ9H3P2 528 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 LRCH1Q9Y2L9 728 aa13.44□□□□□ -0.26
CASC4-208ENST00000559151 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 ZNF785A8K8V0 405 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 APOL1O14791 398 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 TBC1D4O60343 1298 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 UBXN2BQ14CS0 331 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 CSRP2Q16527 193 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 C4orf46Q504U0 113 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 INO80DQ53TQ3 878 aaPredicted RBP13.43□□□□□ -0.26
CASC4-208ENST00000559151 ANO1Q5XXA6 986 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 DOK3Q7L591 496 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 TFAP2CQ92754 450 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 TRIM43Q96BQ3 446 aaPredicted RBP13.43□□□□□ -0.26
CASC4-208ENST00000559151 ZC3H10Q96K80 434 aaKnown RBP13.43□□□□□ -0.26
CASC4-208ENST00000559151 MSL2Q9HCI7 577 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 HDAC5Q9UQL6 1122 aa13.43□□□□□ -0.26
CASC4-208ENST00000559151 CDHR4A6H8M9 788 aa13.42□□□□□ -0.26
CASC4-208ENST00000559151 HTRA4P83105 476 aaPredicted RBP13.42□□□□□ -0.26
CASC4-208ENST00000559151 ATXN7L2Q5T6C5 722 aaPredicted RBP13.42□□□□□ -0.26
CASC4-208ENST00000559151 UTP14CQ5TAP6 766 aaKnown RBP13.42□□□□□ -0.26
CASC4-208ENST00000559151 TAX1BP1Q86VP1 789 aa13.42□□□□□ -0.26
CASC4-208ENST00000559151 SYT8Q8NBV8 401 aa13.42□□□□□ -0.26
CASC4-208ENST00000559151 CPPED1Q9BRF8 314 aaPredicted RBP13.42□□□□□ -0.26
CASC4-208ENST00000559151 NBNO60934 754 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 UNC5CO95185 931 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 GNAI2P04899 355 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 SLC6A2P23975 617 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 EPHB4P54760 987 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 CTBP1Q13363 440 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 TRIM14Q14142 442 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 GPRIN1Q7Z2K8 1008 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 FAM83AQ86UY5 434 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 PDSS2Q86YH6 399 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 OR10H5Q8NGA6 315 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
CASC4-208ENST00000559151 BRIP1Q9BX63 1249 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms