RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 ROR1Q01973 937 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 MTMR3Q13615 1198 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ZBTB6Q15916 424 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 IER5LQ5T953 404 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 GPR65Q8IYL9 337 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 SYCP3Q8IZU3 236 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 HDAC7Q8WUI4 952 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ING5Q8WYH8 240 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ASIC4Q96FT7 647 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ACCSQ96QU6 501 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 FAM213AQ9BRX8 229 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 BLZF1Q9H2G9 400 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 PLEKHA5Q9HAU0 1116 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 KCNK12Q9HB15 430 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ZDHHC7Q9NXF8 308 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 UBQLN1Q9UMX0 589 aaKnown RBP13.6□□□□□ -0.23
SMAD3-208ENST00000558827 PCDHA7Q9UN72 937 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 USTQ9Y2C2 406 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 BACE2Q9Y5Z0 518 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ANK1P16157 1881 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PRRG1O14668 218 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 POLR2DO15514 142 aaKnown RBP13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PPP6R2O75170 966 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PPP1R37O75864 691 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 YEATS4O95619 227 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 ELF1P32519 619 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 AFMP43652 599 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 WNT7BP56706 349 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 ASIC1P78348 528 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 TMEM132DQ14C87 1099 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 L1TD1Q5T7N2 865 aaKnown RBP13.59□□□□□ -0.23
SMAD3-208ENST00000558827 SCARA3Q6AZY7 606 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PDXDC1Q6P996 788 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 CRELD2Q6UXH1 353 aaPredicted RBP13.59□□□□□ -0.23
SMAD3-208ENST00000558827 GRAMD1CQ8IYS0 662 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 BEST2Q8NFU1 509 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 FAM122AQ96E09 287 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 MFSD14AQ96MC6 490 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PGLYRP2Q96PD5 576 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 RPP25Q9BUL9 199 aaKnown RBP13.59□□□□□ -0.23
SMAD3-208ENST00000558827 STRA6Q9BX79 667 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 CYP4F11Q9HBI6 524 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 DNMT3BQ9UBC3 853 aaKnown RBP13.59□□□□□ -0.23
SMAD3-208ENST00000558827 PCDHB8Q9UN66 801 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 ZNF318Q5VUA4 2279 aa13.59□□□□□ -0.23
SMAD3-208ENST00000558827 SCN1AP35498 2009 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 H7C4K7 107 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 SYN3O14994 580 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 SPTLC1O15269 473 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 CFHP08603 1231 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 LRPAP1P30533 357 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
SMAD3-208ENST00000558827 E2F4Q16254 413 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 KYAT1Q16773 422 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 SPATA1Q5VX52 437 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 C9orf57Q5W0N0 161 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 SLFN12LQ6IEE8 588 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
SMAD3-208ENST00000558827 CCDC65Q8IXS2 484 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 EFCAB13Q8IY85 973 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 FBXL6Q8N531 539 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 TMEM209Q96SK2 561 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 CBWD1Q9BRT8 395 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 ST6GALNAC4Q9H4F1 302 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 EXOC7Q9UPT5 735 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 ZDHHC9Q9Y397 364 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 PCDHB13Q9Y5F0 798 aa13.58□□□□□ -0.24
SMAD3-208ENST00000558827 TBC1D4O60343 1298 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 XYLBO75191 536 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 HNRNPA1P09651 372 aaKnown RBP eCLIP13.57□□□□□ -0.24
SMAD3-208ENST00000558827 LAMP2P13473 410 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 CPB1P15086 417 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 TFAMQ00059 246 aaKnown RBP13.57□□□□□ -0.24
SMAD3-208ENST00000558827 ADCY1Q08828 1119 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 TDGQ13569 410 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 LMBRD2Q68DH5 695 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-208ENST00000558827 ZNF280DQ6N043 979 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 RNF19BQ6ZMZ0 732 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 USP37Q86T82 979 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 HS6ST3Q8IZP7 471 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 APPL2Q8NEU8 664 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 ZNF461Q8TAF7 563 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 KCNN1Q92952 543 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 SENP8Q96LD8 212 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 CORO1BQ9BR76 489 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 DPP3Q9NY33 737 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 SEL1LQ9UBV2 794 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 SERTAD1Q9UHV2 236 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 FBXL21Q9UKT6 434 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 STYXL1Q9Y6J8 313 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 MORC2Q9Y6X9 1032 aaPredicted RBP13.57□□□□□ -0.24
SMAD3-208ENST00000558827 NOTCH4Q99466 2003 aa13.57□□□□□ -0.24
SMAD3-208ENST00000558827 FRMD3A2A2Y4 597 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 STK25O00506 426 aa13.56□□□□□ -0.24
SMAD3-208ENST00000558827 NRG2O14511 850 aaPredicted RBP13.56□□□□□ -0.24
SMAD3-208ENST00000558827 XPOTO43592 962 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms