RNA–Protein interactions for RNA: ENST00000558211.2

HMGB1P8-201, Transcript of high mobility group box 1 pseudogene 8, humanhuman

BASIC

Gene HMGB1P8, Length 949 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P8-201ENST00000558211 CCDC94Q9BW85 323 aaPredicted RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 GZF1Q9H116 711 aaPredicted RBP13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 STYXL1Q9Y6J8 313 aa13.08□□□□□ -0.32
HMGB1P8-201ENST00000558211 CITO14578 2027 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 TBKBP1A7MCY6 615 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 PDXKO00764 312 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 RECQL4O94761 1208 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 LETM1O95202 739 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 CCNE1P24864 410 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 PMS1P54277 932 aaKnown RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 YARSP54577 528 aaKnown RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 ANKRD40Q6AI12 368 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 FAM109BQ6ICB4 259 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 PRICKLE2Q7Z3G6 844 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 HERC6Q8IVU3 1022 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZNF295-AS1Q8N0V1 137 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 MLKLQ8NB16 471 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 GOLGA5Q8TBA6 731 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 P2RX5Q93086 422 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 EEF2KMTQ96G04 330 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 DHTKD1Q96HY7 919 aaPredicted RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 ACAP3Q96P50 834 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 GAD1Q99259 594 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 TSG101Q99816 390 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 ELAC1Q9H777 363 aaKnown RBP13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 RSAD1Q9HA92 442 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 HSPBP1Q9NZL4 362 aa13.07□□□□□ -0.32
HMGB1P8-201ENST00000558211 EXOC3O60645 756 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 LDHAP00338 332 aaKnown RBP13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 NR3C1P04150 777 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CXCL8P10145 99 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 MLH1P40692 756 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 PPP1R2P41236 205 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 SNRPFP62306 86 aaKnown RBP13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 TYRO3Q06418 890 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 PAK1Q13153 545 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 ELOAQ14241 798 aaKnown RBP13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 COBLL1Q53SF7 1204 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CLLU1OSQ5K130 101 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CEP135Q66GS9 1140 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CENPPQ6IPU0 288 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 GLB1LQ6UWU2 654 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 ANKMY2Q8IV38 441 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 GPD1LQ8N335 351 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 XXYLT1Q8NBI6 393 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 PHOSPHO2Q8TCD6 241 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CXCL16Q9H2A7 254 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 RPF1Q9H9Y2 349 aaKnown RBP13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 ANO10Q9NW15 660 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 CGNQ9P2M7 1197 aaKnown RBP13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 TRAF3IP3Q9Y228 551 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 GBF1Q92538 1859 aa13.06□□□□□ -0.32
HMGB1P8-201ENST00000558211 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 A6NJY4 79 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 EXTL3O43909 919 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 OFD1O75665 1012 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 DGKIO75912 1065 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 GJB5O95377 273 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 POMCP01189 267 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 CLTAP09496 248 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 MYOGP15173 224 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 NR2F2P24468 414 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 AFF1P51825 1210 aaKnown RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 PTSQ03393 145 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 SPAG1Q07617 926 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 ADAM9Q13443 819 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 STX1AQ16623 288 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZSCAN23Q3MJ62 389 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 GLRA4Q5JXX5 417 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 CRELD2Q6UXH1 353 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 CBWD2Q8IUF1 395 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 RPS6KC1Q96S38 1066 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 PRO3102Q9H379 93 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 UBN1Q9NPG3 1134 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 MIOSQ9NXC5 875 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 CPSF3Q9UKF6 684 aaKnown RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
HMGB1P8-201ENST00000558211 TDRD15B5MCY1 1934 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 BICDL2A1A5D9 508 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 ZNF233A6NK53 670 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 KIAA0391O15091 583 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 FAM189A1O60320 539 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 CCDC192P0DO97 292 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 CASP4P49662 377 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 SCNN1GP51170 649 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 SEC13P55735 322 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 FOXK2Q01167 660 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 RNASELQ05823 741 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 POU4F2Q12837 409 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 BTG3Q14201 252 aaPredicted RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 ENOX2Q16206 610 aaKnown RBP13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 KYAT1Q16773 422 aa13.04□□□□□ -0.32
HMGB1P8-201ENST00000558211 TPD52L1Q16890 204 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms