RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 ZBTB6Q15916 424 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
RCCD1-209ENST00000557750 TMEM173Q86WV6 379 aaPredicted RBP13.24□□□□□ -0.29
RCCD1-209ENST00000557750 NT5DC4Q86YG4 428 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 MFSD14AQ96MC6 490 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 UROC1Q96N76 676 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 DUSP9Q99956 384 aaKnown RBP13.24□□□□□ -0.29
RCCD1-209ENST00000557750 COLEC11Q9BWP8 271 aa13.24□□□□□ -0.29
RCCD1-209ENST00000557750 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.24□□□□□ -0.29
RCCD1-209ENST00000557750 F8W810 466 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 PODXLO00592 558 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 MAPK13O15264 365 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 GRM6O15303 877 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 B3GAT3O94766 335 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 CSPG5O95196 566 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 TMEM191BP0C7N4 346 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 KRT13P13646 458 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 CYP3A5P20815 502 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 ERCC5P28715 1186 aaPredicted RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 IRS1P35568 1242 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 KRT17Q04695 432 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 HYAL1Q12794 435 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 CLUL1Q15846 466 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 UPP1Q16831 310 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 TPD52L1Q16890 204 aaPredicted RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 CTC1Q2NKJ3 1217 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 SPATA1Q5VX52 437 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 FOXR2Q6PJQ5 311 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 INTS8Q75QN2 995 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 USP37Q86T82 979 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 WDR49Q8IV35 697 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 ZC3H3Q8IXZ2 948 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 TMEM130Q8N3G9 435 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 HASPINQ8TF76 798 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 CACTINQ8WUQ7 758 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 DDX27Q96GQ7 796 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 IGSF21Q96ID5 467 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 FAM84AQ96KN4 292 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 POP1Q99575 1024 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 MKNK1Q9BUB5 465 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 MTMR12Q9C0I1 747 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 ALG13Q9NP73 1137 aaKnown RBP13.23□□□□□ -0.29
RCCD1-209ENST00000557750 MARCH5Q9NX47 278 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 DPP3Q9NY33 737 aa13.23□□□□□ -0.29
RCCD1-209ENST00000557750 SLC16A3O15427 465 aaKnown RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 NCK2O43639 380 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 TADA2AO75478 443 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 KIF4AO95239 1232 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 FGFR1OPO95684 399 aaKnown RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 TNNC2P02585 160 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 ITGB1P05556 798 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 CCDC192P0DO97 292 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 RPL9P32969 192 aaKnown RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 VAMP7P51809 220 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 DUOXA2Q1HG44 320 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 ZSCAN23Q3MJ62 389 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 PARD3BQ8TEW8 1205 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 BCL7CQ8WUZ0 217 aaPredicted RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 ANKRD36BP1Q96IX9 119 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 CEP63Q96MT8 703 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 CGRRF1Q99675 332 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 DNAJC25Q9H1X3 360 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 INTS13Q9NVM9 706 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 PTPRJQ12913 1337 aa13.22□□□□□ -0.29
RCCD1-209ENST00000557750 FNDC1Q4ZHG4 1894 aaPredicted RBP13.22□□□□□ -0.29
RCCD1-209ENST00000557750 NLRC5Q86WI3 1866 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 LRRIQ3A6PVS8 624 aaPredicted RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 DLG4P78352 724 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 PLCB3Q01970 1234 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 BFSP1Q12934 665 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 CCDC40Q4G0X9 1142 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 DCLRE1AQ6PJP8 1040 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 C11orf57Q6ZUT1 292 aaPredicted RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 HFE2Q6ZVN8 426 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 OR5B17Q8NGF7 314 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 PLEKHO2Q8TD55 490 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 MED15Q96RN5 788 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 LMAN2LQ9H0V9 348 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 KCNH6Q9H252 994 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 ARMCX3Q9UH62 379 aaPredicted RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 PUF60Q9UHX1 559 aaKnown RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 ADAM28Q9UKQ2 775 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 R3HCC1Q9Y3T6 440 aaKnown RBP13.21□□□□□ -0.29
RCCD1-209ENST00000557750 NUB1Q9Y5A7 615 aa13.21□□□□□ -0.29
RCCD1-209ENST00000557750 GOLGA6L3A6NEY3 463 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 MBTPS2O43462 519 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 ITGB3P05106 788 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 KRT19P08727 400 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 TRIM49P0CI25 452 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 TRIM49CP0CI26 452 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 LRPAP1P30533 357 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 GTF2F1P35269 517 aaKnown RBP eCLIP13.21□□□□□ -0.3
RCCD1-209ENST00000557750 ANO6Q4KMQ2 910 aa13.21□□□□□ -0.3
RCCD1-209ENST00000557750 DCAF17Q5H9S7 520 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms