RNA–Protein interactions for RNA: ENST00000557490.5

TUBB3-214, Transcript of tubulin beta 3 class III, humanhuman

TSL 5

Gene TUBB3, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-214ENST00000557490 ASB7Q9H672 318 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 SLC39A2Q9NP94 309 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 DERAQ9Y315 318 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 WDR87Q6ZQQ6 2873 aa17.23■□□□□ 0.35
TUBB3-214ENST00000557490 TMEM221A6NGB7 291 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 M0R296 226 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 TULP1O00294 542 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 KIAA0391O15091 583 aaKnown RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 TEX28O15482 410 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 IL18RAPO95256 599 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 EPCAMP16422 314 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 PSMD2Q13200 908 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 RTP2Q5QGT7 225 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 JADE1Q6IE81 842 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 KANK3Q6NY19 840 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 ELMSAN1Q6PJG2 1045 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 PRSS55Q6UWB4 352 aaPredicted RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 CD300LGQ6UXG3 332 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 TRIM67Q6ZTA4 783 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 SUGP1Q8IWZ8 645 aaKnown RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 SMRP1Q8NCR6 262 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 C3orf58Q8NDZ4 430 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 NOC3LQ8WTT2 800 aaKnown RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 PIK3R5Q8WYR1 880 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 SAAL1Q96ER3 474 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 POP1Q99575 1024 aaKnown RBP17.22■□□□□ 0.35
TUBB3-214ENST00000557490 CBWD1Q9BRT8 395 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 CHMP5Q9NZZ3 219 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 FNIP2Q9P278 1114 aa17.22■□□□□ 0.35
TUBB3-214ENST00000557490 DMDP11532 3685 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 I3L4J1 428 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 KLRC4O43908 158 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 EXTL3O43909 919 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 GLUD1P00367 558 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 FGFR3P22607 806 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 IGFBP6P24592 240 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-214ENST00000557490 LRPAP1P30533 357 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 MCM4P33991 863 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 HOXD13P35453 343 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 BRCC3P46736 316 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 CLCN4P51793 760 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 SNRPFP62306 86 aaKnown RBP17.21■□□□□ 0.35
TUBB3-214ENST00000557490 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
TUBB3-214ENST00000557490 PSMD5Q16401 504 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 KMT5BQ4FZB7 885 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 SPATA1Q5VX52 437 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 SYCE2Q6PIF2 218 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
TUBB3-214ENST00000557490 HS2ST1Q7LGA3 356 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 NELFCDQ8IXH7 590 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 SCFD1Q8WVM8 642 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 APOL5Q9BWW9 433 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 PCIF1Q9H4Z3 704 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 DPP7Q9UHL4 492 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 C2CD2Q9Y426 696 aa17.21■□□□□ 0.35
TUBB3-214ENST00000557490 GOLGA8IPA6NC78 632 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 GOLGA8JA6NMD2 632 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 RPN1P04843 607 aaKnown RBP17.2■□□□□ 0.34
TUBB3-214ENST00000557490 NFICP08651 508 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 BMT2Q1RMZ1 405 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 CES5AQ6NT32 575 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 BRSK2Q8IWQ3 736 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 GPD1LQ8N335 351 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 FBXL6Q8N531 539 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-214ENST00000557490 S1PR5Q9H228 398 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 RBAKQ9NYW8 714 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-214ENST00000557490 USP15Q9Y4E8 981 aaPredicted RBP17.2■□□□□ 0.34
TUBB3-214ENST00000557490 CITO14578 2027 aa17.2■□□□□ 0.34
TUBB3-214ENST00000557490 TPRP12270 2363 aaKnown RBP17.2■□□□□ 0.34
TUBB3-214ENST00000557490 TCHHQ07283 1943 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 NCOR2Q9Y618 2525 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 SYN3O14994 580 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 C1RP00736 705 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 PRR29P0C7W0 189 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 RPL17P18621 184 aaKnown RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 TKTP29401 623 aaKnown RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 GUCY2FP51841 1108 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 ITIH3Q06033 890 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 STK4Q13043 487 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 RARS2Q5T160 578 aaKnown RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 ANKS3Q6ZW76 656 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 PALB2Q86YC2 1186 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 NT5DC4Q86YG4 428 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 GLYCTKQ8IVS8 523 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 ZSWIM2Q8NEG5 633 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 ATOH1Q92858 354 aaPredicted RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 KIAA1586Q9HCI6 787 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 HSPBP1Q9NZL4 362 aa17.19■□□□□ 0.34
TUBB3-214ENST00000557490 CGNQ9P2M7 1197 aaKnown RBP17.19■□□□□ 0.34
TUBB3-214ENST00000557490 ZNF233A6NK53 670 aa17.18■□□□□ 0.34
TUBB3-214ENST00000557490 TGFB1I1O43294 461 aa17.18■□□□□ 0.34
TUBB3-214ENST00000557490 FAM160A1Q05DH4 1040 aa17.18■□□□□ 0.34
TUBB3-214ENST00000557490 DPYDQ12882 1025 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms