RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 GBP1P32455 592 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ZKSCAN8Q15776 578 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ZNF394Q53GI3 561 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ZFYVE27Q5T4F4 411 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 GPRASP2Q96D09 838 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 SCLT1Q96NL6 688 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 NINJ2Q9NZG7 142 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 HACL1Q9UJ83 578 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ZNF214Q9UL59 606 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 CCT8L1PA6NM43 557 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 THAP12O43422 761 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 CYP1A1P04798 512 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ZSCAN5DPP0CG00 497 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 FDX1P10109 184 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ETS1P14921 441 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 GNA15P30679 374 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 GTF2H1P32780 548 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 MCCD1P59942 119 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 ABHD15Q6UXT9 468 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 FUKQ8N0W3 1084 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 HAUS1Q96CS2 278 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 A1CFQ9NQ94 594 aaKnown RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 RBAKQ9NYW8 714 aaPredicted RBP18.85■□□□□ 0.61
XRCC3-218ENST00000557439 FBXO40Q9UH90 709 aa18.85■□□□□ 0.61
XRCC3-218ENST00000557439 TCP11X1B4DZS4 312 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 PROSCO94903 275 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 CENPCQ03188 943 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 MAMLD1Q13495 774 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 PTK6Q13882 451 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 PRKG1Q13976 671 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 FAM182AQ5T1J6 154 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 CYP4F22Q6NT55 531 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 CAPN12Q6ZSI9 719 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 PIGWQ7Z7B1 504 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 USP37Q86T82 979 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 MCPH1Q8NEM0 835 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 REPS2Q8NFH8 660 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 RUNDC3BQ96NL0 473 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 TMEM109Q9BVC6 243 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 TTC4O95801 387 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 GLRA2P23416 452 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 BACE1P56817 501 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 NOMO3P69849 1222 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 KLF1Q13351 362 aaPredicted RBP18.84■□□□□ 0.61
XRCC3-218ENST00000557439 DRP2Q13474 957 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 CUL2Q13617 745 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 TRMT10CQ7L0Y3 403 aaKnown RBP18.84■□□□□ 0.61
XRCC3-218ENST00000557439 TMEM130Q8N3G9 435 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 NSUN6Q8TEA1 469 aaKnown RBP18.84■□□□□ 0.61
XRCC3-218ENST00000557439 WRNIP1Q96S55 665 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 PLVAPQ9BX97 442 aa18.84■□□□□ 0.61
XRCC3-218ENST00000557439 MAP3K20Q9NYL2 800 aaKnown RBP18.84■□□□□ 0.61
XRCC3-218ENST00000557439 TLR3O15455 904 aaKnown RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 ITIH2P19823 946 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 CNTN2Q02246 1040 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 PSMD6Q15008 389 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 TXNRD3NBQ6F5E7 133 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 CYB5D1Q6P9G0 228 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 DHX37Q8IY37 1157 aaKnown RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 RBBP8NLQ8NC74 664 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 SLCO2A1Q92959 643 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 ZNF668Q96K58 619 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 OSBPL8Q9BZF1 889 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 FHDC1Q9C0D6 1143 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 ACTR5Q9H9F9 607 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 AVENQ9NQS1 362 aaPredicted RBP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 CYP39A1Q9NYL5 469 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.83■□□□□ 0.6
XRCC3-218ENST00000557439 GJA3Q9Y6H8 435 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 TNFSF9P41273 254 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 MFSD5Q6N075 450 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 ARMC9Q7Z3E5 817 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 FAM228AQ86W67 206 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 FAM212AQ96EL1 285 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 SAMD15Q9P1V8 674 aa18.83■□□□□ 0.6
XRCC3-218ENST00000557439 GAS8O95995 478 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 CST3P01034 146 aaPredicted RBP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 ATF7P17544 494 aaPredicted RBP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 STRN3Q13033 797 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 IZUMO3Q5VZ72 239 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 GSTA5Q7RTV2 222 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 MICALL2Q8IY33 904 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 ATL2Q8NHH9 583 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 MRRFQ96E11 262 aaKnown RBP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 SENP7Q9BQF6 1050 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 MSTO1Q9BUK6 570 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 C17orf75Q9HAS0 396 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 NOP14P78316 857 aaKnown RBP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 ENOSF1Q7L5Y1 443 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 TAOK1Q7L7X3 1001 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 ZBTB33Q86T24 672 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 SRRM1Q8IYB3 904 aaKnown RBP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 ABRAQ8N0Z2 381 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 AGAP1Q9UPQ3 857 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.82■□□□□ 0.6
XRCC3-218ENST00000557439 NEU2Q9Y3R4 380 aa18.82■□□□□ 0.6
XRCC3-218ENST00000557439 PARP14Q460N5 1801 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 K7ERI5 159 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 ASAP2O43150 1006 aa18.81■□□□□ 0.6
XRCC3-218ENST00000557439 BRAFP15056 766 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms