RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 C9orf57Q5W0N0 161 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 ISM2Q6H9L7 571 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 PDXDC1Q6P996 788 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 CEP57Q86XR8 500 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 ADSSL1Q8N142 457 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 FNBP1Q96RU3 617 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 CLSTN2Q9H4D0 955 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 RXFP1Q9HBX9 757 aa14.7□□□□□ -0.06
SHMT2-228ENST00000557302 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 BIN1O00499 593 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 SYN3O14994 580 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 LINC01565O15544 149 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 CLASP2O75122 1294 aaKnown RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 ADH1AP07327 375 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 CNPP09543 421 aaKnown RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 SRGAP2BP0DMP2 458 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 DLATP10515 647 aaKnown RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PAX3P23760 479 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 NR2F2P24468 414 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 RPL13P26373 211 aaKnown RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 TKTP29401 623 aaKnown RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PPP1R2P41236 205 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 NDUFV1P49821 464 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 ADAM15Q13444 863 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 MORC3Q14149 939 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PSMD6Q15008 389 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PSMD5Q16401 504 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 CTC1Q2NKJ3 1217 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 EDRF1Q3B7T1 1238 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 ZCWPW2Q504Y3 356 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 CEP135Q66GS9 1140 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PRSS55Q6UWB4 352 aaPredicted RBP14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PPFIBP1Q86W92 1011 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 WDR49Q8IV35 697 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 PIK3R5Q8WYR1 880 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 CCDC127Q96BQ5 260 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 ANKRD36BP1Q96IX9 119 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 SUSD3Q96L08 255 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 MFSD14AQ96MC6 490 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 KLHL5Q96PQ7 755 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 TSG101Q99816 390 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 NUP62CLQ9H1M0 184 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 INTS13Q9NVM9 706 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 KIAA1468Q9P260 1216 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 FRMD4BQ9Y2L6 1034 aa14.69□□□□□ -0.06
SHMT2-228ENST00000557302 ANO9A1A5B4 782 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 PIRO00625 290 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 PSMA7O14818 248 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 PPEF2O14830 753 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 TEX28O15482 410 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 TNNC2P02585 160 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 TNNI1P19237 187 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 KCNA5P22460 613 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 KLRC2P26717 231 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 AARSP49588 968 aaKnown RBP eCLIP14.68□□□□□ -0.06
SHMT2-228ENST00000557302 DUOXA2Q1HG44 320 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 AAK1Q2M2I8 961 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 LMBRD2Q68DH5 695 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-228ENST00000557302 CENPPQ6IPU0 288 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 LLGL2Q6P1M3 1020 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 C1orf127Q8N9H9 656 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 TRIML1Q8N9V2 468 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 APPL2Q8NEU8 664 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 LNX1Q8TBB1 728 aaPredicted RBP14.68□□□□□ -0.06
SHMT2-228ENST00000557302 FAM84AQ96KN4 292 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 ZNF560Q96MR9 790 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 CGRRF1Q99675 332 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 MTMR12Q9C0I1 747 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 FNIP2Q9P278 1114 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 ITGA11Q9UKX5 1188 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 PCDHB8Q9UN66 801 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 R3HCC1Q9Y3T6 440 aaKnown RBP14.68□□□□□ -0.06
SHMT2-228ENST00000557302 HCFC2Q9Y5Z7 792 aa14.68□□□□□ -0.06
SHMT2-228ENST00000557302 PTPRJQ12913 1337 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ANK1P16157 1881 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 M0QZQ0 153 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 TBX10O75333 385 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 GLP2RO95838 553 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ITGB3P05106 788 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 POLR2BP30876 1174 aaKnown RBP14.67□□□□□ -0.06
SHMT2-228ENST00000557302 LTBRP36941 435 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 PNPLA4P41247 253 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 CASP4P49662 377 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 TAF6P49848 677 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 LILRA4P59901 499 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 RBM10P98175 930 aaKnown RBP14.67□□□□□ -0.06
SHMT2-228ENST00000557302 TFF2Q03403 129 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ADAM9Q13443 819 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 DSTYKQ6XUX3 929 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ANKS3Q6ZW76 656 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 CSGALNACT2Q8N6G5 542 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 VN1R2Q8NFZ6 395 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 OR5B17Q8NGF7 314 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ATXN2LQ8WWM7 1075 aaKnown RBP14.67□□□□□ -0.06
SHMT2-228ENST00000557302 CASP10Q92851 521 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 DHTKD1Q96HY7 919 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-228ENST00000557302 BARX2Q9UMQ3 279 aaPredicted RBP14.67□□□□□ -0.06
SHMT2-228ENST00000557302 AGAP1Q9UPQ3 857 aa14.67□□□□□ -0.06
SHMT2-228ENST00000557302 ARHGEF37A1IGU5 675 aa14.66□□□□□ -0.06
SHMT2-228ENST00000557302 H3BQ06 376 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms