RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 CDKN1CP49918 316 aaPredicted RBP5.61□□□□□ -1.51
ATXN3-246ENST00000557030 TERF1P54274 439 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 SRSF2Q01130 221 aaKnown RBP5.61□□□□□ -1.51
ATXN3-246ENST00000557030 EXOSC9Q06265 439 aaKnown RBP5.61□□□□□ -1.51
ATXN3-246ENST00000557030 USP51Q70EK9 711 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ADAMTS13Q76LX8 1427 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 GPRIN1Q7Z2K8 1008 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 CHD1LQ86WJ1 897 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 CNTD1Q8N815 330 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ST8SIA2Q92186 375 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ARHGAP45Q92619 1136 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ARL8AQ96BM9 186 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 LSM14BQ9BX40 385 aaKnown RBP5.61□□□□□ -1.51
ATXN3-246ENST00000557030 GPR87Q9BY21 358 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 KRTAP17-1Q9BYP8 105 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 PARPBPQ9NWS1 579 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 GPRC5BQ9NZH0 403 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 POLKQ9UBT6 870 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 TMEM2Q9UHN6 1383 aa5.61□□□□□ -1.51
ATXN3-246ENST00000557030 EDC4Q6P2E9 1401 aaKnown RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 PPIP5K1Q6PFW1 1433 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 KIF24Q5T7B8 1368 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 CASRP41180 1078 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 ABHD18Q0P651 414 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 FAPQ12884 760 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 CRHR2Q13324 411 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 FAM214AQ32MH5 1076 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 ABHD15Q6UXT9 468 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 Q6ZPA2 131 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 RHOUQ7L0Q8 258 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 DOK3Q7L591 496 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 GSPT2Q8IYD1 628 aaKnown RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 OR52N2Q8NGI0 321 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 ATXN2LQ8WWM7 1075 aaKnown RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 AUTS2Q8WXX7 1259 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 SSH1Q8WYL5 1049 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 TNPO1Q92973 898 aaKnown RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 PANK2Q9BZ23 570 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 CPEB1Q9BZB8 566 aaKnown RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 TRIM8Q9BZR9 551 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 CSRNP2Q9H175 543 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 DNAJC28Q9NX36 388 aa5.6□□□□□ -1.51
ATXN3-246ENST00000557030 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-246ENST00000557030 SRCAPQ6ZRS2 3230 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 PTPRUQ92729 1446 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 PIK3R4Q99570 1358 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 PLEKHG1Q9ULL1 1385 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 OSMP13725 252 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 CTSSP25774 331 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 MCM7P33993 719 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 GPR3P46089 330 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 GUCY2FP51841 1108 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 NUCB2P80303 420 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 RABEP1Q15276 862 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 CSRP2Q16527 193 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 KLHL40Q2TBA0 621 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 RABL3Q5HYI8 236 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 KCNK18Q7Z418 384 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 TMEM57Q8N5G2 664 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 PRPF38AQ8NAV1 312 aaKnown RBP5.59□□□□□ -1.51
ATXN3-246ENST00000557030 SNX33Q8WV41 574 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 STAG1Q8WVM7 1258 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 TSR2Q969E8 191 aaKnown RBP5.59□□□□□ -1.51
ATXN3-246ENST00000557030 IL17RAQ96F46 866 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 RAX2Q96IS3 184 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 PPP1R9BQ96SB3 815 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 MAP7D2Q96T17 732 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 MRIQ9BWK5 157 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 EPC1Q9H2F5 836 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 CCM2LQ9NUG4 571 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-246ENST00000557030 SCOCQ9UIL1 159 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 NOB1Q9ULX3 412 aaKnown RBP5.59□□□□□ -1.51
ATXN3-246ENST00000557030 AKAP12Q02952 1782 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 MON2Q7Z3U7 1717 aa5.59□□□□□ -1.51
ATXN3-246ENST00000557030 LRRC7Q96NW7 1537 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 ARHGAP23Q9P227 1491 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 PTCH1Q13635 1447 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 AATKQ6ZMQ8 1374 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 GOLGA6L6A8MZA4 724 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 KATNA1O75449 491 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 GYPEP15421 78 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 NR4A1P22736 598 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 MSNP26038 577 aaKnown RBP5.58□□□□□ -1.52
ATXN3-246ENST00000557030 GZMKP49863 264 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 RIPK4P57078 832 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 ERVK-21P61565 698 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 DUSP2Q05923 314 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 ITKQ08881 620 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 LMOD3Q0VAK6 560 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 CASC1Q6TDU7 716 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 PCSK4Q6UW60 755 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 ZSCAN30Q86W11 494 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 OR5M3Q8NGP4 307 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 ZNF483Q8TF39 744 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-246ENST00000557030 TSPEARQ8WU66 669 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 LARP4BQ92615 738 aaKnown RBP5.58□□□□□ -1.52
ATXN3-246ENST00000557030 MTMR8Q96EF0 704 aa5.58□□□□□ -1.52
ATXN3-246ENST00000557030 MMRN2Q9H8L6 949 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms