RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 KCTD10Q9H3F6 313 aa11.58□□□□□ -0.56
LINC00239-201ENST00000556973 DPP3Q9NY33 737 aa11.58□□□□□ -0.56
LINC00239-201ENST00000556973 BARX2Q9UMQ3 279 aaPredicted RBP11.58□□□□□ -0.56
LINC00239-201ENST00000556973 PRUNE2Q8WUY3 3088 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 UNC80Q8N2C7 3258 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 ANO9A1A5B4 782 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 I3L4J1 428 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 M0QZQ0 153 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 TULP1O00294 542 aaPredicted RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 SYN3O14994 580 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 MBTPS2O43462 519 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 KINO60870 393 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 PRPF40AO75400 957 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 NFICP08651 508 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 EPCAMP16422 314 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 MCM4P33991 863 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 LILRA4P59901 499 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 SMAD4Q13485 552 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 MYBPC2Q14324 1141 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 CLUL1Q15846 466 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 PSMD5Q16401 504 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 C9orf57Q5W0N0 161 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 ELMSAN1Q6PJG2 1045 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 PRSS55Q6UWB4 352 aaPredicted RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 CLEC17AQ6ZS10 378 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 EFCAB13Q8IY85 973 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 RDH13Q8NBN7 331 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 SMRP1Q8NCR6 262 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 HDAC7Q8WUI4 952 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 SUSD3Q96L08 255 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 CLSTN3Q9BQT9 956 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 GTPBP4Q9BZE4 634 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 DZANK1Q9NVP4 752 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 DMAC2Q9NW81 257 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 PCDHB8Q9UN66 801 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 TRAF3IP3Q9Y228 551 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 BACE2Q9Y5Z0 518 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 MYO7AQ13402 2215 aa11.57□□□□□ -0.56
LINC00239-201ENST00000556973 TCF20Q9UGU0 1960 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 SPTBN5Q9NRC6 3674 aaKnown RBP11.57□□□□□ -0.56
LINC00239-201ENST00000556973 H7C4K7 107 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 CALUO43852 315 aaPredicted RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 EXOC3O60645 756 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 GLUD1P00367 558 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 RPL17P18621 184 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 TKTP29401 623 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 AARSP49588 968 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 CYP2J2P51589 502 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 GUCY2FP51841 1108 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 TFAMQ00059 246 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 ITIH3Q06033 890 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 MRPL58Q14197 206 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 SMAD2Q15796 467 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 SNRNP35Q16560 246 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 ZNF658Q5TYW1 1059 aaPredicted RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 CES5AQ6NT32 575 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 LILRA6Q6PI73 481 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 SYCE2Q6PIF2 218 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 DSTYKQ6XUX3 929 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 PALB2Q86YC2 1186 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 CBWD2Q8IUF1 395 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 GUF1Q8N442 669 aaKnown RBP11.56□□□□□ -0.56
LINC00239-201ENST00000556973 APPL2Q8NEU8 664 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 SMARCE1Q969G3 411 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 S1PR5Q9H228 398 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 PLEKHA4Q9H4M7 779 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 PDE11AQ9HCR9 933 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 TSHZ2Q9NRE2 1034 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 MTRRQ9UBK8 725 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 PCDHA5Q9Y5H7 936 aa11.56□□□□□ -0.56
LINC00239-201ENST00000556973 ARHGEF37A1IGU5 675 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 TGM5O43548 720 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 OAZ2O95190 189 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 IL9P15248 144 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 PNPLA4P41247 253 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 WNT7BP56706 349 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 RAB33AQ14088 237 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 PSMD6Q15008 389 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 NFIL3Q16649 462 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 DUOXA2Q1HG44 320 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 COBLL1Q53SF7 1204 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 VARS2Q5ST30 1063 aaKnown RBP11.55□□□□□ -0.56
LINC00239-201ENST00000556973 GLYCTKQ8IVS8 523 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 TMEM130Q8N3G9 435 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 CSGALNACT2Q8N6G5 542 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 ADAMTS19Q8TE59 1207 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 ANKRD36BP1Q96IX9 119 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 MFSD14AQ96MC6 490 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 FNBP1Q96RU3 617 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 OXCT2Q9BYC2 517 aaPredicted RBP11.55□□□□□ -0.56
LINC00239-201ENST00000556973 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 INTS13Q9NVM9 706 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 PRKAG3Q9UGI9 489 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 ITGA11Q9UKX5 1188 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 MAPK8IP1Q9UQF2 711 aa11.55□□□□□ -0.56
LINC00239-201ENST00000556973 R3HCC1Q9Y3T6 440 aaKnown RBP11.55□□□□□ -0.56
LINC00239-201ENST00000556973 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 KPNA7A9QM74 516 aa11.54□□□□□ -0.56
LINC00239-201ENST00000556973 TBC1D4O60343 1298 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms