RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 KRT19P08727 400 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 TRIM49P0CI25 452 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 TRIM49CP0CI26 452 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 POLR2BP30876 1174 aaKnown RBP18.9■□□□□ 0.62
PSEN1-218ENST00000556864 GTF2H1P32780 548 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 TAF6P49848 677 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 MYL5Q02045 173 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 ANO6Q4KMQ2 910 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 TCERG1LQ5VWI1 586 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 TRAPPC11Q7Z392 1133 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 ENOX1Q8TC92 643 aaKnown RBP18.9■□□□□ 0.62
PSEN1-218ENST00000556864 SPPL3Q8TCT6 385 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 MRPL38Q96DV4 380 aaKnown RBP18.9■□□□□ 0.62
PSEN1-218ENST00000556864 CNOT6LQ96LI5 555 aaKnown RBP18.9■□□□□ 0.62
PSEN1-218ENST00000556864 ENTPD7Q9NQZ7 604 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 CHD9Q3L8U1 2897 aa18.9■□□□□ 0.62
PSEN1-218ENST00000556864 PIRO00625 290 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 SOD2P04179 222 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 GLUD2P49448 558 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 MARSP56192 900 aaKnown RBP18.89■□□□□ 0.61
PSEN1-218ENST00000556864 MYO1EQ12965 1108 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 TRPC3Q13507 836 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 SMC1AQ14683 1233 aaKnown RBP18.89■□□□□ 0.61
PSEN1-218ENST00000556864 PDXDC1Q6P996 788 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-218ENST00000556864 Q7L0L9 218 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 VPS52Q8N1B4 723 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 C3orf58Q8NDZ4 430 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 PPP2R3CQ969Q6 453 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 BORCS6Q96GS4 357 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 GZF1Q9H116 711 aaPredicted RBP18.89■□□□□ 0.61
PSEN1-218ENST00000556864 ZBP1Q9H171 429 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 LMCD1Q9NZU5 365 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 AGAP1Q9UPQ3 857 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 SSX2IPQ9Y2D8 614 aa18.89■□□□□ 0.61
PSEN1-218ENST00000556864 F8W810 466 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 N4BP1O75113 896 aaKnown RBP18.88■□□□□ 0.61
PSEN1-218ENST00000556864 CLSTN1O94985 981 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 CAVIN2O95810 425 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 MXI1P50539 228 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 DLG4P78352 724 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 CREMQ03060 361 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 USP41Q3LFD5 358 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 ZACNQ401N2 412 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 KIAA1841Q6NSI8 718 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 TMC7Q7Z402 723 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
PSEN1-218ENST00000556864 SUSD3Q96L08 255 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 POP1Q99575 1024 aaKnown RBP18.88■□□□□ 0.61
PSEN1-218ENST00000556864 TCF25Q9BQ70 676 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 BPIFA3Q9BQP9 254 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 FUCA2Q9BTY2 467 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 TMEM8AQ9HCN3 771 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 NGRNQ9NPE2 291 aaKnown RBP18.88■□□□□ 0.61
PSEN1-218ENST00000556864 NFE2L3Q9Y4A8 694 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 PLXNA4Q9HCM2 1894 aa18.88■□□□□ 0.61
PSEN1-218ENST00000556864 RFXAPO00287 272 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 SYN3O14994 580 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 EFEMP2O95967 443 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 CTSAP10619 480 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 ODC1P11926 461 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 CA8P35219 290 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 PIK3CAP42336 1068 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 AARSP49588 968 aaKnown RBP eCLIP18.87■□□□□ 0.61
PSEN1-218ENST00000556864 MCCD1P59942 119 aaPredicted RBP18.87■□□□□ 0.61
PSEN1-218ENST00000556864 FAM171A1Q5VUB5 890 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 TDRD10Q5VZ19 366 aaKnown RBP18.87■□□□□ 0.61
PSEN1-218ENST00000556864 DSTYKQ6XUX3 929 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 GPR65Q8IYL9 337 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 APPL2Q8NEU8 664 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 FAM84AQ96KN4 292 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 MED15Q96RN5 788 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 VN1R3Q9BXE9 311 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 IMPG2Q9BZV3 1241 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 MMRN2Q9H8L6 949 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 MRPL17Q9NRX2 175 aaKnown RBP18.87■□□□□ 0.61
PSEN1-218ENST00000556864 SIX4Q9UIU6 781 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 PCDHB8Q9UN66 801 aa18.87■□□□□ 0.61
PSEN1-218ENST00000556864 LAMA2P24043 3122 aaKnown RBP18.86■□□□□ 0.61
PSEN1-218ENST00000556864 PPEF2O14830 753 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 FSCN2O14926 492 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 CSPG5O95196 566 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 FOSL2P15408 326 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 IGFBP4P22692 258 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 ATICP31939 592 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 MTIF2P46199 727 aaKnown RBP18.86■□□□□ 0.61
PSEN1-218ENST00000556864 BRCC3P46736 316 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 GCLMP48507 274 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 LILRA4P59901 499 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 MYL7Q01449 175 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 NCOA4Q13772 614 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 C1orf220Q5T0J3 134 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 PLPP4Q5VZY2 271 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 KRT39Q6A163 491 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 SV2AQ7L0J3 742 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 TRIM59Q8IWR1 403 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 CCDC150Q8NCX0 1101 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 ANKRD20A12PQ8NF67 263 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 MICAL1Q8TDZ2 1067 aa18.86■□□□□ 0.61
PSEN1-218ENST00000556864 MYLIPQ8WY64 445 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms