RNA–Protein interactions for RNA: ENST00000556771.5

MTHFD1-214, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-214ENST00000556771 CNPP09543 421 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 KLRC2P26717 231 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 LTBRP36941 435 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 AARSP49588 968 aaKnown RBP eCLIP11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 PNOCQ13519 176 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 TAS1R1Q7RTX1 841 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 SLC9A9Q8IVB4 645 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 GUF1Q8N442 669 aaKnown RBP11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 C3orf58Q8NDZ4 430 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 APPL2Q8NEU8 664 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 RIN2Q8WYP3 895 aaPredicted RBP11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 SMARCE1Q969G3 411 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 MSLNLQ96KJ4 702 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 SUSD3Q96L08 255 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 GBP4Q96PP9 640 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 KCTD10Q9H3F6 313 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 PCIF1Q9H4Z3 704 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 CD207Q9UJ71 328 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 TRAF3IP3Q9Y228 551 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 HCFC2Q9Y5Z7 792 aa11.44□□□□□ -0.58
MTHFD1-214ENST00000556771 ANO9A1A5B4 782 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 GOLGA8IPA6NC78 632 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 GOLGA8JA6NMD2 632 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 H7C4K7 107 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 TEX28O15482 410 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 LINC01565O15544 149 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CALUO43852 315 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 GADD45BO75293 160 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 GLUD1P00367 558 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 MCM4P33991 863 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 PPP1R2P41236 205 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 PNPLA4P41247 253 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CYP2J2P51589 502 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CLCN4P51793 760 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 TFF2Q03403 129 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 SPAG1Q07617 926 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 SMAD4Q13485 552 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 PSMD5Q16401 504 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 SNRNP35Q16560 246 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 NFIL3Q16649 462 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 COBLL1Q53SF7 1204 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 RTP2Q5QGT7 225 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CD300LGQ6UXG3 332 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CEP57Q86XR8 500 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 SMRP1Q8NCR6 262 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 VN1R2Q8NFZ6 395 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 NOC3LQ8WTT2 800 aaKnown RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 SLC22A17Q8WUG5 538 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 HDAC7Q8WUI4 952 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 ZNF560Q96MR9 790 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 OXCT2Q9BYC2 517 aaPredicted RBP11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 DPP3Q9NY33 737 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 CLEC1BQ9P126 229 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 MTRRQ9UBK8 725 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 ITGA11Q9UKX5 1188 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 PCDHA5Q9Y5H7 936 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
MTHFD1-214ENST00000556771 H3BQ06 376 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 M0QZQ0 153 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 PIRO00625 290 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 CLIC2O15247 247 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 GALR2O43603 387 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 EXOC3O60645 756 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 TMEM191BP0C7N4 346 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 BRCC3P46736 316 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 TFAMQ00059 246 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 ITIH3Q06033 890 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 DLX2Q07687 328 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 PSMD6Q15008 389 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 ZNF658Q5TYW1 1059 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 C9orf57Q5W0N0 161 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 PTCRAQ6ISU1 281 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 ANKRD54Q6NXT1 300 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 CBWD2Q8IUF1 395 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 WDR49Q8IV35 697 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 EFCAB13Q8IY85 973 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 LNX1Q8TBB1 728 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 ANKRD36BP1Q96IX9 119 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 FNBP1Q96RU3 617 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 PLEKHA4Q9H4M7 779 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 PDE11AQ9HCR9 933 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 DMAC2Q9NW81 257 aa11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 BARX2Q9UMQ3 279 aaPredicted RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 R3HCC1Q9Y3T6 440 aaKnown RBP11.42□□□□□ -0.58
MTHFD1-214ENST00000556771 VWA8A3KMH1 1905 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 GRXCR2A6NFK2 248 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 MAPK13O15264 365 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 TNNC2P02585 160 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 NR3C1P04150 777 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 BMP1P13497 986 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 TYMPP19971 482 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 RPL13P26373 211 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 TKTP29401 623 aaKnown RBP11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 TIE1P35590 1138 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 TAF6P49848 677 aa11.41□□□□□ -0.58
MTHFD1-214ENST00000556771 AP3M2P53677 418 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms