RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 RAB20Q9NX57 234 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 DNAJB4Q9UDY4 337 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 FAN1Q9Y2M0 1017 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 PRG3Q9Y2Y8 225 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 MRPL42Q9Y6G3 142 aaKnown RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 ANO9A1A5B4 782 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 ARHGEF37A1IGU5 675 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 GRXCR1A8MXD5 290 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 TNRC18O15417 2968 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-225ENST00000556517 TADA2AO75478 443 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 HLA-DRAP01903 254 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 TAF6P49848 677 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 TNNC1P63316 161 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 EXOC3L4Q17RC7 722 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 PRPF38BQ5VTL8 546 aaKnown RBP13.47□□□□□ -0.25
ABCD4-225ENST00000556517 KCNT2Q6UVM3 1135 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 C15orf39Q6ZRI6 1047 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 TAS1R2Q8TE23 839 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 HPDLQ96IR7 371 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 FAM84AQ96KN4 292 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 IFNKQ9P0W0 207 aa13.47□□□□□ -0.25
ABCD4-225ENST00000556517 SF3B1O75533 1304 aaKnown RBP eCLIP13.46□□□□□ -0.251e-6■■■■■ 160.8
ABCD4-225ENST00000556517 CITO14578 2027 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 A0A1B0GTH6 734 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 PIRO00625 290 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 NRP1O14786 923 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 CA3P07451 260 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 SLC11A1P49279 550 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 MYL6P60660 151 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 FAM109BQ6ICB4 259 aaPredicted RBP13.46□□□□□ -0.25
ABCD4-225ENST00000556517 COLGALT1Q8NBJ5 622 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 TMEM169Q96HH4 297 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 SAMD11Q96NU1 681 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 TRIM5Q9C035 493 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 CWH43Q9H720 699 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 SLC28A3Q9HAS3 691 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 RTN4Q9NQC3 1192 aaKnown RBP13.46□□□□□ -0.25
ABCD4-225ENST00000556517 SPG21Q9NZD8 308 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 HCSTQ9UBK5 93 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 STK39Q9UEW8 545 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 SIX4Q9UIU6 781 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 ADAM28Q9UKQ2 775 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
ABCD4-225ENST00000556517 LCHNA4D1U4 455 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 LINC01553A4QN01 128 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 KPNA7A9QM74 516 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 TMEM189-UBE2V1I3L0A0 370 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 B4GALT3O60512 393 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 KIF4AO95239 1232 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 STAU1O95793 577 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 ASS1P00966 412 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 GALTP07902 379 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 CTNNB1P35222 781 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PBX3P40426 434 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 NOP14P78316 857 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 SMAD3P84022 425 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 KRT17Q04695 432 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 ELAVL2Q12926 359 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 WDR72Q3MJ13 1102 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 EPC2Q52LR7 807 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PPP2R2DQ66LE6 453 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 SARM1Q6SZW1 724 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 DSTYKQ6XUX3 929 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 APTXQ7Z2E3 356 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 HASPINQ8TF76 798 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 RABGGTAQ92696 567 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 CLP1Q92989 425 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 NT5C1BQ96P26 610 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PAAF1Q9BRP4 392 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 CRACR2AQ9BSW2 395 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PLVAPQ9BX97 442 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PBX4Q9BYU1 374 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 INTS2Q9H0H0 1204 aaKnown RBP13.45□□□□□ -0.26
ABCD4-225ENST00000556517 PRO3102Q9H379 93 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 CACNG4Q9UBN1 327 aa13.45□□□□□ -0.26
ABCD4-225ENST00000556517 NT5C1B-RDH14C9J2C7 533 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 PPEF2O14830 753 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 HUS1O60921 280 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 VNN1O95497 513 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 CST3P01034 146 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 ODC1P11926 461 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 MYOGP15173 224 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 DNAJB2P25686 324 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 LILRA4P59901 499 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 GSE1Q14687 1217 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 SYCP1Q15431 976 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 TRIM65Q6PJ69 517 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 EHBP1Q8NDI1 1231 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 FAM81BQ96LP2 452 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 NAP1L5Q96NT1 182 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 TGS1Q96RS0 853 aaKnown RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 MMS19Q96T76 1030 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 PI4K2AQ9BTU6 479 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 C11orf84Q9BUA3 381 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 XPO4Q9C0E2 1151 aaKnown RBP13.44□□□□□ -0.26
ABCD4-225ENST00000556517 DNAI2Q9GZS0 605 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 NIF3L1Q9GZT8 377 aa13.44□□□□□ -0.26
ABCD4-225ENST00000556517 VRTNQ9H8Y1 702 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms